Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01] 72 sequences; 42,385,401 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 147 2e-30 seq3 145 5e-30 seq1 111 1e-19 >seq4 Length=5284358 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||| || || ||||| |||||| || |||||||| || Sbjct 3189603 CATACCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTC 3189662 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || |||||||| || |||||||| | ||||||||| || | Sbjct 3189663 GGAGAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGG 3189722 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||||| | | || ||||| | || || Sbjct 3189723 CGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATCGTGTCAGATGACTC 3189782 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| ||| |||||||| |||||||||||||| |||||||| ||||| Sbjct 3189783 GACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833 Score = 127 bits (140), Expect = 1e-24 Identities = 150/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||||||| |||||| || ||||||||||||| ||| || |||| || Sbjct 3189853 ACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAGAGGGTTCGGCCGTCCTCA 3189912 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| ||||||||||| | || | || ||||| ||| Sbjct 3189913 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 3189972 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | || || |||| || || ||||| | || || |||| Sbjct 3189973 ATCTTCGACTTAACATTGT--CGATAGTATCGGACGACTCGACCTCAAGGGTGATGGTCT 3190030 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | ||||| |||||||| |||| Sbjct 3190031 TGCCCGTCAGGGTCTTGACGA 3190051 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||| || ||| ||| ||| | || ||||||||||| || || || Sbjct 3189414 CTCCTTCTGGATGTTATAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAA 3189473 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||||||||| || | ||| | ||| ||||| ||| ||||| ||||| | Sbjct 3189474 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTT 3189533 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || |||||| || |||||||| | || || ||||| || || |||||||| || Sbjct 3189534 GTCAATCGTGTCGCTCGACTCCACCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGAC 3189593 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 3189594 GAAGATCTGCAT 3189605 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| |||||||||||||||| || ||| |||| || Sbjct 3190137 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCGTCCTCA 3190196 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | |||||||| || | ||| | || ||||| ||| Sbjct 3190197 AGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3190256 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || || || | ||| || ||||| | || || ||||| Sbjct 3190257 ATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 3190316 Query 44309 CCCGTGA 44315 || |||| Sbjct 3190317 CCAGTGA 3190323 >seq3 Length=5313354 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| ||||||||||| |||| ||| ||| | || || Sbjct 4707934 CACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 4707993 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||||| || | || | || ||||| ||| Sbjct 4707994 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 4708053 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||||| || |||||||| | || || ||||| Sbjct 4708054 GATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 4708113 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| ||||| || ||||| Sbjct 4708114 CCCCGTGAGGGTCTTGACGAAAATCTGCAT 4708143 >seq1 Length=7437554 Score = 111 bits (122), Expect = 1e-19 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGG 44201 |||| |||| ||||||||||| || | ||| ||| | || || |||||||| |||| Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990 Query 44202 CAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT-- 44259 | || |||| |||||||| || | || | || ||||| ||| |||||| ||| Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050 Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319 || ||| | |||||||| | ||| || ||||| | || || ||||| ||||| ||||| Sbjct 2327051 CATTGT--CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGT 2327108 Query 44320 CTTCACGAA 44328 ||||||||| Sbjct 2327109 CTTCACGAA 2327117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990084108424