Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 4e-32
seq4 140 8e-28
seq1 131 4e-25
>seq3
Length=5313354
Score = 154 bits (170), Expect = 4e-32
Identities = 147/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || ||||||||||||||||| || |||
Sbjct 4708140 CAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 4708081
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 4708080 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 4708021
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | || || |||| || ||| ||
Sbjct 4708020 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATC 4707961
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 4707960 CAGAAGGA 4707953
>seq4
Length=5284358
Score = 140 bits (154), Expect = 8e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||||||||| || ||| || || ||||| ||||||||
Sbjct 3190323 TCACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGATACTATCGACAACGTCAAGT 3190264
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || |||||||| |||||||| || || || ||||| || |
Sbjct 3190263 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTCATTTTCGCTGGCA 3190204
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | |||||| ||||||| ||| |||| || || || || || |
Sbjct 3190203 AGCAGCTTGAGGACGGCCGCACTCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCC 3190144
Query 178123 ATCTTGT 178129
| |||||
Sbjct 3190143 ACCTTGT 3190137
Score = 134 bits (148), Expect = 3e-26
Identities = 156/209 (75%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || || || || || || || |||||||| |||||||| |||
Sbjct 3189602 CAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTAGAGGTGGAGTCGAGC--- 3189546
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||| || || ||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 3189545 GACACGATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 3189486
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || ||||||||||| || || ||||| || ||||| | || || ||| ||||||
Sbjct 3189485 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTATAAC 3189426
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || ||||||||
Sbjct 3189425 ATCCAGAAGGAGTCTACCCTCCATCTTGT 3189397
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || |||||||| || ||||| || || |||
Sbjct 3189830 CAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTCGAGTCATCTGAC 3189771
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||||||||||| || || ||||| || ||||||||
Sbjct 3189770 ACGATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 3189711
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| || || | || || |||| || ||| |
Sbjct 3189710 CGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATT 3189651
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || |||||||| ||
Sbjct 3189650 CAGAAGGAGTCGACGCTGCATCTCGT 3189625
Score = 111 bits (122), Expect = 4e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || || || || |||||||| ||||| || || || || ||||
Sbjct 3190051 TCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACTATCG 3189992
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || |||||||||||||| || || ||||| ||||| ||||| || || |
Sbjct 3189991 ACAATGTTAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGCCTGA 3189932
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
||||||| || || ||||| || || || | || || ||||||| ||| | || || |
Sbjct 3189931 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGATTACAACATTCAGAAGG 3189872
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || || ||
Sbjct 3189871 AGTCCACGCTTCACCTGGT 3189853
>seq1
Length=7437554
Score = 131 bits (144), Expect = 4e-25
Identities = 137/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || || || || || || |||||||| ||||| || ||| ||||||||
Sbjct 2327118 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 2327059
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || ||||| || |||||||| || ||
Sbjct 2327058 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCT 2326999
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|| |||||||| || |||||||| ||||| | || || | || || ||| |||| ||
Sbjct 2326998 GATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAACATCCAGAA 2326939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730089557968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |