Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gliomastix_20tumulicola_20[genbank_20GCA_5F001599755.1_202016-03-01]
72 sequences; 42,385,401 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 3e-40
seq4 165 8e-36
seq1 134 1e-26
>seq3
Length=5313354
Score = 179 bits (198), Expect = 3e-40
Identities = 180/231 (78%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| || || || |||||||||||||| ||||| |||||||||
Sbjct 4707917 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 4707976
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || |||||||||||||||||||| ||||||||||| ||||| | |||
Sbjct 4707977 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 4708036
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||||||
Sbjct 4708037 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCAC 4708095
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | || || || || ||||| || ||||| |||||||||||||| ||
Sbjct 4708096 CTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 4708146
>seq4
Length=5284358
Score = 165 bits (182), Expect = 8e-36
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| ||||||||||| ||||||||||||||| |||||||||
Sbjct 3189607 CCACCACGCAGACGCAGCACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 3189666
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| ||||||||||| || || || || || ||||| ||||| | ||
Sbjct 3189667 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGCGGG 3189726
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| || || |||| || | | | ||||| ||||| ||
Sbjct 3189727 ATGCCCTCCTTGTCCTGAATCTTGCTCTTC-ACATTGTCGATCGTGTCAGATGACTCGAC 3189785
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| ||| ||||| |||||||| || ||||| ||||| ||||||||
Sbjct 3189786 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 3189833
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | || ||||| || || ||||||||| ||||||||||||
Sbjct 3189378 GCCGCCACGAAGACGAAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTATAGTCGCT 3189437
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| | || || |||||||| || ||||| || || ||||| ||||| | ||
Sbjct 3189438 GAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 3189497
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | |||||||||| || || |||| ||| | | | ||||||||||||||||
Sbjct 3189498 AATACCCTCCTTGTCCTGAATCTTGCTCTTC-ACGTTGTCAATCGTGTCGCTCGACTCCA 3189556
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || ||||| ||||| ||||| ||||||||
Sbjct 3189557 CCTCTAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 3189605
Score = 152 bits (168), Expect = 5e-32
Identities = 166/218 (76%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || |||||| ||||||||||||||| || ||||||
Sbjct 3189835 CCACCACGAAGGCGGAGGACCAGGTGAAGCGTGGACTCCTTCTGAATGTTGTAATCGGAG 3189894
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || ||||||||||| ||||| ||||||||||| || |||| |||
Sbjct 3189895 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGG 3189954
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | ||| ||| |||||| ||
Sbjct 3189955 ATGCCCTCCTTGTCC-TGAATCTTCGACTTAACATTGTCGATAGTATCGGACGACTCGAC 3190013
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || || || |||||||| ||||| ||||
Sbjct 3190014 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 3190051
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || || ||| ||||||||| ||||| || |||||
Sbjct 3190118 GCCACCGCGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 3190177
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| |||| || ||||||||||| ||||| || |||||||| ||||| | ||
Sbjct 3190178 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCGGGAGG 3190237
Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 3190238 GATGCCCTCCTTGTCCTGGATCTT 3190261
>seq1
Length=7437554
Score = 134 bits (148), Expect = 1e-26
Identities = 145/190 (76%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 41667 TGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGG 41726
|||| ||||||| ||||| ||||| ||||||||||| | || ||||||||||||||||
Sbjct 2326931 TGCTAACCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGG 2326990
Query 41727 CGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT-- 41784
|||| ||||||||||| ||||| | ||| | || |||||||||| ||| || |||
Sbjct 2326991 CGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA 2327050
Query 41785 CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGT 41844
|| | || | ||||| ||||| ||||| | || || || || |||||||| ||
Sbjct 2327051 CATTGTCG--ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGT 2327108
Query 41845 CTTTACGAAA 41854
||| ||||||
Sbjct 2327109 CTTCACGAAA 2327118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303583926400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |