Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1023 129 1e-24 seq1044 102 2e-16 >seq1023 Length=12933 Score = 129 bits (142), Expect = 1e-24 Identities = 182/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| ||||| || ||| || || |||||||| || ||||| | ||| ||||| Sbjct 7316 ATCATCACAGAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGCATTGCCA-GTCGC 7374 Query 230446 CTTA-TTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| ||||||||||| | |||| ||| | ||||||||||| || || || ||||| | Sbjct 7375 ATTACTTGGCATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTGACCGTTT 7434 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 || | ||| | || || |||| || || | | ||||| |||| || ||||| Sbjct 7435 GCTTCTGGCATTGGGCAACAAGAAGTACTATCACGCAACAAACCCGTTTGACTTCATGGA 7494 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| || || ||| ||||| ||||||||||| ||||| || ||||||| |||| Sbjct 7495 GAACATCTCTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 7554 Query 230625 GCCTGGTGTGATG 230637 | ||||||| ||| Sbjct 7555 GGCTGGTGTTATG 7567 >seq1044 Length=7244 Score = 102 bits (112), Expect = 2e-16 Identities = 249/370 (67%), Gaps = 8/370 (2%) Strand=Plus/Minus Query 282393 ACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAGACTGGGAAAAC-A 282451 |||||||| |||||||| | | ||| ||| ||| ||||| || |||||||| || | Sbjct 2971 ACGATAGGCGTGATGAATTCCATCAGGAACCCTTCAATTTTAAGCAGACTGGGGAATTGA 2912 Query 282452 GCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 282511 || || | ||||| |||| || || ||| ||| | || ||| |||| ||||| Sbjct 2911 ACT-TGAAGGAAGTTGATGAGGAGGCCTTTAATATGACTCCCATCATGATCCTGATCGGT 2853 Query 282512 CATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTG 282571 ||||||||||| ||| ||||| | ||| ||||| |||| |||| | || Sbjct 2852 CATGATCATCAAATGGCCGTACCGGAGACTCTTTGTGTCAGTGTATTCTTTTTTGTGCTG 2793 Query 282572 AAGGCCCA-AAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTG--CCAC 282628 ||||||| ||| || || | | | |||||| | ||||| || | ||| | | Sbjct 2792 CAGGCCCATAAACTTCTTGATGTTCTG-GATTTCCTGATTCTT--CGAAATTTGATCAAT 2736 Query 282629 AGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCG 282688 |||||||| |||||||| |||| ||| || || ||||| || ||||| || || | Sbjct 2735 TGATGCATCACGAACGTTGAGCAGCTTTCCACGAAGAGGGAAGACACCGAATAGATCCGG 2676 Query 282689 ACCGACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGAT 282748 | ||| |||| ||| || | |||||| || || || || || || | ||| Sbjct 2675 ATTGACGACGGCTCTTCCAGCCAGTGCAAGCAAACTAGCCGAGTCACCTTCGGTAAGGAT 2616 Query 282749 GAGAGTACAC 282758 ||| |||||| Sbjct 2615 GAGTGTACAC 2606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057786999299900