Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1023 107 2e-18 >seq1023 Length=12933 Score = 107 bits (118), Expect = 2e-18 Identities = 202/294 (69%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 16466 TCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCT 16525 ||| |||| || || ||||||| | ||| | || ||||| |||||||| || Sbjct 6946 TCGCTTATGTAGGTGTCAATCAACAGGGAGTATGTCTCCGAGTGGATGTTCTCCATCATG 6887 Query 16526 ATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCC 16585 ||||| || ||||| |||||||| || || | || ||||||||| || ||||| || Sbjct 6886 ATCTGGAAGCCATAAAAGCATCGCGCTTCTGGTACTTGTACTTCGCCGCTGAATCGCTCA 6827 Query 16586 GCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATG 16645 ||| ||||||||| |||||||| || ||| || || || || | | ||| ||| Sbjct 6826 ACCAAGTTCTCATTGACGATACCATCTGATGCTGCGAAGAATGCGAGGACGTGGGAAATA 6767 Query 16646 AAATATTTTTCGTCAGATGTA-AGAA---TATGCCAATCTTTTAAATCTTTGGATATATC 16701 || | ||||| | ||| ||| | | ||| || | | ||||||||||| ||| Sbjct 6766 AAGAAGCGCTCGTC-GTTGTTGAGACGCTTGTTCCAGTCGTGAAGATCTTTGGATAGATC 6708 Query 16702 CACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | |||||| | ||||| ||| || ||||||| || ||||| | ||| || Sbjct 6707 AATTTCTTCGGCGGTCCAGAAGGATGCTTCTGCCTTCTTGTACATCTGCCAGAT 6654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511396947983600