Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1467 197 2e-45 >seq1467 Length=78481 Score = 197 bits (218), Expect = 2e-45 Identities = 588/898 (65%), Gaps = 8/898 (1%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || |||||| |||| |||||| ||| | || || | | | | Sbjct 49511 TCAAACTCGTCGCCATAAACATCTGCCAAACCAGGAGCTTCGTTAGGGCAGAAAAGTGTC 49452 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || | | || ||||| ||||| || ||||| |||||||| | || || Sbjct 49451 CAGCTACCATTTTGCTCGACTCGCTTCATGAAAAGATCTGGAATCCACAAGGCGTAGAAG 49392 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || |||| || | | ||||| || || ||||||| ||||| || || | Sbjct 49391 AGGTCTCGGGCACGAACCTCCTCCTTGCCGTGATTCTTTCGGAGATCAAGAAAACTGAAG 49332 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||||| ||||| || || | ||| |||| | | || ||||| || || || ||| Sbjct 49331 ACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCGGGCCGCTTATTCCCACCC 49272 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | || | ||| ||||| || || |||| |||||||| || | || || ||| Sbjct 49271 TGGTCAACATAGCGAGCAGTGTTGTTGTAGACTCGTAACATTGGTATTAGGCCGTTCGAT 49212 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | ||| || || || ||||| ||| | |||||||| | |||||| Sbjct 49211 GTACCGTTCGTTCCACCAATATATGAACCAGTAGCACGAATGCGGTGGACGTTTAGACCA 49152 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATAGATGCCCTC 54369 || || || || |||| ||||| | || || |||||| | || ||||| ||||| || Sbjct 49151 ATACCGCCAGCGGTTTTGGAGATCATGGCACA-CGTTTTCAGTGTGTCATAAATGCCTTC 49093 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGTTC 54428 || || || ||| |||||| || || || || ||||| | ||| || || | Sbjct 49092 GATGCTGTCTTCCTTCATGTCAATGAGGAAGCATGAGGACATCT-GTGCAGAGGGCGTGC 49034 Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488 | ||||| |||| || || ||||| || ||||| |||| | || | || ||||| Sbjct 49033 CGGCATTGAATAGTGTGGGCGAAGCATGAGTAAAGTATTTGTTGGACATATAATCGTACG 48974 Query 54489 TCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548 |||| | ||| || ||||| |||||| || || || |||||||| | ||||| Sbjct 48973 TCTCTAGTGCTTTCTCAATATCTTCGCCATGAATGCCAACGGCAACACGCATGAGCATGT 48914 Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608 |||| |||| ||| | ||||| || ||| || | || ||| ||| | || | Sbjct 48913 GCTGTGGTCGCTCAGCAGTCTTGCCGTCGATTCGTAGGAGATATGATCGTTCAAGTGTCT 48854 Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668 | || ||||| | | ||| |||||||| ||||||| ||| | ||||| | | | Sbjct 48853 TGAATCCAAAGAATTGGTAGTTGAAGTCTCGGTCGTAAACTATAGCGGAGTTCAAGTCTT 48794 Query 54669 CCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGAATGTTTCCC 54726 || |||||| | || | || ||| | | ||| || || ||||| | || ||| Sbjct 48793 CCGCATATTTCATGACAATGTCGTATGTT--TCCTTCGAGATCATCGGCGCGTGCTTCTT 48736 Query 54727 ATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGT 54786 || ||||| || | |||| | | || ||||| | ||| | || ||||| Sbjct 48735 GTTCTTAGGGTTAATGTAGTGGTAGAGGTCAGATATCACCGCCGAGAATTGCTTCTTTGT 48676 Query 54787 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 54844 || |||||| ||||| || || || || | ||| ||||| || ||||| || |||||| Sbjct 48675 TTGTTTGTGAAGATTAGAAACAGCAATGCGAGCTGCTAGGATCGCATAGTCAGGATGT 48618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593701339250400