Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1886 107 2e-18 seq8 102 8e-17 seq1747 87.8 2e-12 >seq1886 Length=76891 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| || || || || ||||||||||| || | || || ||| | | Sbjct 24094 ATGCAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCA 24153 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || |||| || || |||||||| || |||| || Sbjct 24154 GATACTATTGACAACG-TCAAGTCTAAGATTCAGGATAAGGAGGGCATTCCTCCGGATCA 24212 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | ||| ||||| ||| |||| |||| || || || ||||||||| Sbjct 24213 ACAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAA 24272 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||| |||||| | || || ||| | ||| Sbjct 24273 CATCCAAAAGGAGTCAACTCTCCATTTGGTG 24303 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || || |||||||| |||| |||||| | | Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||| || || | ||||| || ||||| ||| |||| || Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| |||||||| ||||| || || | || || ||| |||||||||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 40870 ATCCAGAAGGA 40880 || || ||||| Sbjct 24046 ATTCAAAAGGA 24056 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || || || | |||| | | | |||| | ||| Sbjct 23434 ACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAACGTT-AAGTC 23492 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| || |||||||| | |||||||| || | |||| ||||||||| Sbjct 23493 GAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCGGGCAA 23552 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || |||| | || || |||||||| |||||||||||| |||| || || Sbjct 23553 GCAGCTCGAAGACGGCAGGACTCTGTCGGACTACAATATCCAGAAGGAGTCCACTCTACA 23612 Query 40893 TCTAGTGTTGCGC 40905 ||| ||| | ||| Sbjct 23613 TCTCGTGCTCCGC 23625 >seq8 Length=21116 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| ||||||| || || || |||| ||| ||||| || || || Sbjct 1545 GACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTTGAG 1486 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||| ||| |||||||||||||||||||||| | || || || || || Sbjct 1485 GACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTCGT 1430 >seq1747 Length=57527 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| |||||||||||| |||| || ||| | | || | | Sbjct 35091 TTCGTCAAGACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAATCGAGTGATACTATC 35032 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || || | || || |||||||| ||| ||||||| || || | Sbjct 35031 GACAATGTAAAGTCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAACAGCGCTTG 34972 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || | || || | || || || | ||||||||||||||||||| Sbjct 34971 ATCTTCGCTGGAAAGCAATTAGAGGATGGCCGGACGCTTAGCGACTACAACATCCAGAAG 34912 Query 40879 G 40879 | Sbjct 34911 G 34911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515201618144800