Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1886 113 4e-20 >seq1886 Length=76891 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| |||||||| |||||| || ||||| |||||| ||||| || ||| Sbjct 23834 GTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23775 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| |||||||| || || ||||| || ||||||||||| || || || Sbjct 23774 GCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 23715 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| || |||| ||||||||| | || | || || ||||| || || Sbjct 23714 ACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTC 23655 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 23654 TTGACGAAGATCTGCAT 23638 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | ||||| || |||||||||||||| ||| | || || |||||| Sbjct 24075 CACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTC 24016 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || ||||||||||||| ||||| || || ||||| |||||||| Sbjct 24015 AAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTG 23956 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | || |||| ||||| |||| || | || || Sbjct 23955 GATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTT 23896 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||||||||| Sbjct 23895 TCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || |||| | | |||||| |||| || ||||| ||||| |||||||| ||| Sbjct 24321 ACCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGA 24262 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || || ||||| | ||| || || ||| | || |||||||| ||||| ||||| Sbjct 24261 AAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 24202 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||||||||| || ||| || || || | || | || || | || || Sbjct 24201 AATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAAC 24142 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||||||||| ||||| || || || || ||||| Sbjct 24141 TTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433815965649160