Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1886 100 3e-16 >seq1886 Length=76891 Score = 100 bits (110), Expect = 3e-16 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 ||| || || || | || ||| | ||||||||| | || ||||||||| || ||||| Sbjct 24327 CTACTGACCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTA 24268 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || | || || || |||| || | |||||| || ||||| || || ||||| || || Sbjct 24267 GTCGGAAAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATC 24208 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACC-GTGTCGCTC 43127 | || | || |||||| ||| ||| | || | |||| ||| | || || || Sbjct 24207 CGGAGGAATGCCCTCCTTATCC-TGAATCTTAGACTTGA-CGTTGTCAATAGTATCTGAA 24150 Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || | || ||||||||||| ||||| ||||| || || |||||||| Sbjct 24149 GATTCAACTTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||| | ||| | ||| |||||| || |||||||| || | |||||||| |||| || Sbjct 23619 CACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCTTC 23560 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | ||||||||||| | ||| | || ||||||||| | Sbjct 23559 GAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC-T 23501 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 | | || | | | ||| | | | || ||| ||| ||||| || | |||||||| | Sbjct 23500 GGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGTCT 23441 Query 43153 TGCCCGT 43159 |||| || Sbjct 23440 TGCCGGT 23434 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| || | || || || | || || |||||||| || || || Sbjct 24056 TCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAG 23997 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||| || || | || | || ||||||||| ||| || || | | Sbjct 23996 ATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTA 23937 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || || |||||| || |||| |||||||| || || || |||||||| || Sbjct 23936 TCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACG 23877 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 23876 AAAATCTGCAT 23866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571798086724400