Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1886 122 6e-23 seq1747 91.5 1e-13 >seq1886 Length=76891 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | |||| ||| || || |||||||||||||| ||| ||| | || Sbjct 24077 AGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCC 24018 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || ||||| ||||| || || ||| | || |||||||| Sbjct 24017 TCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 23958 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||| | ||||||||| || | |||||||| Sbjct 23957 TGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTC 23898 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||||||| || || || || |||||||| Sbjct 23897 TTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| || | ||| || || || |||||||||||||| Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||||||||||||| |||||||| || ||||| || || || Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | | || | ||| | ||||| || Sbjct 24200 ATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACT 24141 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || |||||||||||||| ||||| || || || || ||||| Sbjct 24140 TCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || |||||||| ||||| || |||||| Sbjct 23864 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAC 23805 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || || ||||| ||||| || Sbjct 23804 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 23745 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | ||| | || ||||| Sbjct 23744 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACC 23685 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| || |||||||| || || || ||||||||||| Sbjct 23684 TCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || |||| ||| || ||||| || |||||||| ||||| | | |||| Sbjct 23621 AGCACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCT 23562 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 || | ||||||||| ||||| || | ||||||||||| | |||| | || |||||||| Sbjct 23561 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGG-ATGCCTTCCTTGTC 23503 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | | || | ||||| ||| || || || | |||||||| Sbjct 23502 CTGGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGT 23443 Query 34357 TTTGCCGGT 34365 |||||||| Sbjct 23442 CTTGCCGGT 23434 >seq1747 Length=57527 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || || ||||| || ||||| || Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 | ||||| ||||| ||| | || |||||| || ||||| ||||| || | | Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | ||| ||||||| || || | ||||||||||| || ||||| || || || ||| Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAAG 35092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323061250788800