Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1467 257 1e-63 seq1023 111 1e-19 seq1886 100 3e-16 >seq1467 Length=78481 Score = 257 bits (284), Expect = 1e-63 Identities = 436/630 (69%), Gaps = 4/630 (1%) Strand=Plus/Minus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| |||||||| || ||||| | |||||||| || || ||||| || |||||||| | Sbjct 49426 TCATGAAAAGATCTGGAATCCACAAGGCGTAGAAGAGGTCTCGGGCACGAACCTCCTCCT 49367 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 ||||| |||||| | ||| | ||| || || || || ||||| |||||||||| Sbjct 49366 TGCCGTGATTCTTTCGGAGATCAAGAAAACTGAAGACATCAGCGTGCCATGGCTCGAGGT 49307 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || || | |||||| || ||||| || || || || || ||||||| Sbjct 49306 AGATGGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGTCAACATAGCGAGCAGTGTTGT 49247 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCACACT 23589 |||| |||| || ||| || | || ||||| || | ||| | || || | | | Sbjct 49246 TGTAGACTCGTAACATTGGTATTAGGCCGTTCGATGTACCG--TTCGTTCCACCAATATA 49189 Query 23590 CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATAT 23649 ||||| | || |||| | ||| |||| | ||| || || || | | ||| || || Sbjct 49188 TGAACCAGTAGCACGAATGCGGTGGACGTTTAGACCAATACCGCCAGCGGTTTTGGAGAT 49129 Query 23650 CATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGAC 23709 ||| || || |||||| ||||| || ||||| ||||||||||| || || | | | Sbjct 49128 CATGGCACACGTTTTCAGTGTGTCATAAATGCCTTCGATGCTGTCTTCCTTCATGTCAAT 49069 Query 23710 CAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGC 23769 | ||| || || ||||| || || |||||| |||| ||| ||||| || || Sbjct 49068 GAGGAAGCATGAGGACATCTGTGCAGAGGGCGTGCCGGCATTGAATAGTGTGGGCGAAGC 49009 Query 23770 GTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTC 23829 || ||||||||| || ||||| || |||||| || | || ||||| || || Sbjct 49008 ATGAGTAAAGTATTTGTTGGACATATAATCGTACGTCTCTAGTGCTTTCTCAATATCTTC 48949 Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCC 23889 || || || || | ||| || ||||| | ||||| || |||| ||| | || ||| Sbjct 48948 GCCATGAATGCCAACGGCAACACGCATGAGCATGTGCTGTGGTCGCTCAGCAGTCTTGCC 48889 Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949 || ||| | |||||||| |||| | || || |||||||| | | ||||| || Sbjct 48888 GTCGATTCGTAGGAGATATGATCGTTCAAGTGTCTTGAATCCAAAGAATTGGTAGTTGAA 48829 Query 23950 GTCACGATCGTGCACTATGGCCGAATTCAA 23979 ||| || |||| ||||| || || ||||| Sbjct 48828 GTCTCGGTCGTAAACTATAGCGGAGTTCAA 48799 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || |||||||| || || ||||| ||||| | |||||||| | ||| || || || Sbjct 49803 GACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATAATCTCTGTGCAA 49744 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 |||||| | || || |||| ||| |||||||||| || |||||||| | || Sbjct 49743 AGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGATTGCAGGCGTCT 49684 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||||| || |||| |||||| || | ||||| || || ||| | Sbjct 49683 TTGTAGAGCATGTATGGGTTGCCGGTCTCGGTTTGGGCCTCGAGAATGGCGTACCAAAGC 49624 Query 23207 GTCTGAGCGTGAACACGTC 23225 ||||||| |||| |||| Sbjct 49623 TTCTGAGCACGAAC-CGTC 49606 >seq1023 Length=12933 Score = 111 bits (122), Expect = 1e-19 Identities = 290/431 (67%), Gaps = 26/431 (6%) Strand=Plus/Plus Query 57976 TAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTT 58034 || ||||||||||||| ||||| ||||| ||| || | | | |||| ||| | || || Sbjct 7116 TAGTCGCGTTCGCCGCGGTCGAGGGTATCTTC-TTCAGCGGATCTTTCGCGTCCATTTTC 7174 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| ||||| || ||||| || | || || ||||| | || |||||| Sbjct 7175 TGGCTTAAGAAGCGCGGACTCATGCCTGGTTTAACCTTCTCGAACGAACTCATCTCGCGC 7234 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT----TGTCAATAA 58150 || |||||| | || || || || || ||||| | | ||||||||| ||| | | Sbjct 7235 GATGAGGGTATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCACATCAAGAGTCGACCA 7294 Query 58151 A--CCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208 | || | | | | | | | | ||| ||||| |||||||| | || || | ||| Sbjct 7295 AGTCCTAAG-GCGGTGGAA-----GCCATCATCACAGAGGCGGTTACAATTGAGCAGGAG 7348 Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268 || | || || || | || || || | || || |||||| | |||||| || Sbjct 7349 TTCCTTACAGACGCATTGCCAGTCGCATTACTTGGCATGAACTCCAAACTGATGTGCCAG 7408 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG--ATTGGAGAGC-GTCATTAC 58325 ||||| ||||||||||| ||| | |||||| ||| ||||| | | | ||| Sbjct 7409 TACATCGAGTTTGTTGCTGAC---CGTTTGCT---TCTGGCATTGGGCAACAAGAAGTAC 7462 Query 58326 -AACACG--AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAAC 58382 | |||| | ||| |||||||| || ||| | ||||| || |||||||||||| Sbjct 7463 TATCACGCAACAAACCCGTTTGACTTCATGGAGAACATCTCTCTGTCAGGCAAGACAAAC 7522 Query 58383 TTTTTCGAAAA 58393 || ||||| || Sbjct 7523 TTCTTCGAGAA 7533 >seq1886 Length=76891 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| ||||| || |||||| | || || || ||||||| | | |||| | || || Sbjct 23432 TGACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAACGTTAAGT 23491 Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334 || || ||||||||||||| | ||||| ||||||||||| | || ||||| |||| Sbjct 23492 CGAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCGGGCA 23551 Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394 | ||| | |||||| | |||| || || || || || || || || || ||||| | Sbjct 23552 AGCAGCTCGAAGACGGCAGGACTCTGTCGGACTACAATATCCAGAAGGAGTCCACTCTAC 23611 Query 31395 ATCTGGTACT 31404 |||| || || Sbjct 23612 ATCTCGTGCT 23621 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || || || | || || || | || Sbjct 23638 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCG 23697 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | ||||| || || ||||||||| || | || || ||||| Sbjct 23698 GATACTATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAA 23757 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || || || |||||||||| Sbjct 23758 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATAAC 23817 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || ||||| || || || | ||| | || |||| Sbjct 23818 ATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTGCGTGGTGGTA 23866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || || ||||| |||| || ||| |||| Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || || | || ||||||||||||| | || || || || Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| | || || || | ||| || ||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| ||||| |||||||| |||| || Sbjct 24046 ATTCAAAAGGAATCTACTCTTCACTTGGTGCT 24077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751188221600