Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1023 95.1 1e-14 seq1886 91.5 1e-13 >seq1023 Length=12933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 52836 AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGG 52895 |||||| || ||||| | ||||| |||| ||||| || || || |||| | || Sbjct 7324 AGAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGCATTGCCAGTCGCATTACTTGG 7383 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG-TTGATGC 52954 ||||||| | | |||||||| ||||||||||||||||||| ||| | || || || Sbjct 7384 CATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTGACCGTTTGCTTCTGGC 7443 Query 52955 AGCTCGGTCAGC-CGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013 | | || || | ||| |||||| | || ||||| ||| || ||| | ||||| Sbjct 7444 A--TTGGGCAACAAGAAGTACTATCACGCAACAAACCCGTTTGACTTCATGGAGAACATC 7501 Query 53014 TCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || || ||||| |||||||| ||||||| || || || || ||| Sbjct 7502 TCTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGTGACTAC 7549 >seq1886 Length=76891 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || |||||||| ||||||||||||||| | Sbjct 23864 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAC 23805 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| |||||||||| || || || ||||| Sbjct 23804 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 23745 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | || || | | ||| ||| Sbjct 23744 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACC 23685 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | ||||| ||||| | || || ||||| || |||||| Sbjct 23684 TCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCATA 23637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496047071816000