Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1886 95.1 9e-15 seq1747 89.7 4e-13 >seq1886 Length=76891 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || || || || ||||| |||||||| ||| || ||| |||| || Sbjct 24302 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 24243 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || ||||| ||| | |||| ||| ||||| || ||||| || || || || | Sbjct 24242 AACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGA 24183 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || ||||| | ||| || || || ||||||||||| Sbjct 24182 ATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTG 24123 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| || || || ||||||||| Sbjct 24122 CCGGTTAGAGTCTTGACGAATATTTGCATA 24093 >seq1747 Length=57527 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 15176 TTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15235 || || |||||||| ||||| || | | | || |||||||| || |||||| | ||| Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 15236 AAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCT 15295 || || |||||||| ||||| || || || || || || ||||||| | || Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 15296 ATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354 || ||||| || |||||| || | ||| ||||||||||| || || || || || || Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362167149618930