Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1467 192 2e-43 seq1389 93.3 1e-13 >seq1467 Length=78481 Score = 192 bits (212), Expect = 2e-43 Identities = 1125/1788 (63%), Gaps = 92/1788 (5%) Strand=Plus/Plus Query 363444 TGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGT 363503 || ||| || || ||||| ||| | ||||||||||| |||| || ||| || ||| | Sbjct 48897 TGCTGAGCGACCACAGCACATGCTCATGCGTGTTGCCGTTGGCATTCATGGCGAAGATAT 48956 Query 363504 TGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACG 363561 ||| || | || || || | || || || | | || || || || || || Sbjct 48957 TGAGAAAGCACTAGAGACGTACGA--TTATATGTCCAACAAATACTTTACTCATGCTTCG 49014 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || ||| | | |||||| || || | | |||||||||| || ||||| || | | Sbjct 49015 CCCACACTATTCAATGCCGGCACGCCCTCTGCACAGATGTCCTCATGCTTCCTCATTGAC 49074 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| || |||||| || || | ||||||||| || | ||||| | || ||| Sbjct 49075 ATGAAGGAAGACAGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCTCC 49134 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACA 363739 || | || ||||| |||||| || ||||| ||||||| || | || || | Sbjct 49135 AAAACCGCTGGCGGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCA--TATA 49192 Query 363740 TTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || | || || || ||| ||||| || || | || ||| | || || | |||| Sbjct 49193 TTGGTGGAACGAACGG-TACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAAC 49251 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| | || || ||||||||||| ||||| || || ||||| || || ||| Sbjct 49252 ACTGCTCGCTATGTTGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTC 49311 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGA 363917 ||||| || || ||| | || |||||||| ||||| || || ||| || || || Sbjct 49312 GAGCCATGGCACGCTGATGTCTTCAGTTTTCTTGATCTCCGAAAGAATCAC-GGCAAGGA 49370 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 ||| | ||||| || || || ||||| || | ||| || | || | ||| |||||||| Sbjct 49371 GGAGGTTCGTGCCCGAGACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAGCG 49430 Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 || ||| | | | ||| |||| || ||||| ||||| ||| ||| | | || Sbjct 49431 AGTCGAGCAAAATGGTAGCTGGACACTTTTCTGCCCTAACGAAGCTCCTGGTTTGGCAGA 49490 Query 364038 TGTATGGGGTGACGACTATG-----TT-----------------GCTCTAT--------- 364066 ||| | || ||||| | || || ||| || Sbjct 49491 TGTTTATGGCGACGAGTTTGAGGAATTATATCACAGGTAAGTGCCCTCCATTGTATTTAG 49550 Query 364067 -----ACGAAA---------------AG-TATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 |||||| || |||||| ||| || | || |||| Sbjct 49551 TGACAACGAAATCTAATCACCTGATCAGATATGAACAGGAAGGCCGCGGCCGCGAGACGG 49610 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 ||| || |||||||| |||| ||||| | || | || | ||||| || | || | Sbjct 49611 TTCGTGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCAT 49670 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 | ||| | |||||||| | ||||| || ||| ||||||| || | || || || |||| Sbjct 49671 ACATGCTCTACAAAGACGCCTGCAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTC 49730 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| ||| || || || |||||||| || ||||| || |||||||| || || Sbjct 49731 -GCAGCTCCAATCTTTGCACAGAGATTATCGAGTACACAGCACCCGACGAAGTGGCTGTC 49789 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTGA- 364337 ||||| |||||||| | || || ||| | || || || |||| | ||| Sbjct 49790 TGTAATCTTGCGTCTCTTGCCCTCCCGTCCTTCGTGGACTACAATCGTGGTGAATATGAT 49849 Query 364338 -CCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTAT 364394 ||| | | | || ||| | | || || ||| |||||||| | || | || Sbjct 49850 TTTGCCA--AGTTGCACGAAGTAGTCCAAGTCGTG--ACTCGCAATCTCAATAAAATCAT 49905 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 ||| || |||| || | || || || || | |||||||| || || Sbjct 49906 CGAAGTCAACCATTACCCTGTCGAAGAGGCTCGCCGCAGCAACTTCCGTCATCGGCCCAT 49965 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 ||||||||| || ||||| || ||||| | || | ||||| | | || ||| Sbjct 49966 TGGTCTTGGCGTCCAGGGTCTTGCTGATGCCTTCCT--TGCTCTTCGTCTTCCTTTCGAT 50023 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || || || || || || | | || || || || || || || || | Sbjct 50024 TCTCCAGAGGCCAAGAAGCTTAACATTCAAATTTTCGAGACCATCTACCACGCTGCGCTC 50083 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 || | || || || | || ||| || || |||| || || || || ||| Sbjct 50084 ACCTCATCCTGCGAGCTTGCTAAAGAACTTGGTCCTTATGCTACCTACGAAGGCTCGCCT 50143 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 |||| ||||| | |||| | || | ||||||||||| || | | || ||| || Sbjct 50144 GTTTCTCAGGGTATCCTCCAATACGACATGTGGAATGTCACTCCCACAGACCTTTGGGAC 50203 Query 364693 TGGGATACGCTACGTTCCAACGTTA-AGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 |||||| | || | || | || | | ||| |||||||||||| || || Sbjct 50204 TGGGATTCACT-CAAGGCATCCATAGCCCAATACGGTGTCCGCAACTCCCTCCTTGTTGC 50262 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 |||||||||||| ||||| || | ||||| || || ||||| || |||||||| || | Sbjct 50263 GCCCATGCCCACAGCTTCCACCTCCCAGATTCTGGGCAACAATGAATGCTTCGAGCCTTA 50322 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || ||| |||| |||||||| || || | || ||||| | ||| || || || Sbjct 50323 CACCTCTAATATTTACTCACGCCGTGTGCTAGCAGGTGAATTCCAGGTCGTCAACCCGTG 50382 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || | || || ||| ||| || || ||| || | |||||| ||| || || Sbjct 50383 GCTCCTAAAAGACCTTGTTGACATGGGTCTTTGGTCCGATAACATGAAAAACCGCATTAT 50442 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 |||| ||| ||| | ||| |||||| |||| || ||| | || || | || Sbjct 50443 AGCCGACGGTGGCTCTATCCAGCGGATTCCAAACATTCCTGACGATATTAAAGCTCTCTA 50502 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGATCGCGG 365048 ||| || || ||||||||||| || || ||||| | ||||| || || || || Sbjct 50503 CAAGACAGTCTGGGAAATTTCTCAACGTAC---CATTGTACAAATGGCTGCTGACCGTGG 50559 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108 |||||| || ||| |||||| | ||| | ||||| |||| ||| | ||| Sbjct 50560 TGCTTTCATTGATCAATCCCAGTCCCTCAACATTCACATGAAAGAGCCGACCATGGGCAA 50619 Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | | || |||||| ||| || ||||| | || || ||||| || Sbjct 50620 GATCACTAGCATGCACTTCGCTGGATGGAAGTTGGGCCTAAAGACTGG 50667 >seq1389 Length=17233 Score = 93.3 bits (102), Expect = 1e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131384 CAAGAGTTCTTATTATCGATGAAGTTTCTATGCTTGATGGAGAATTATTTAATAAACTTG 131443 ||| |||||| |||||||| || ||||| ||| | ||||| || || ||| | || |||| Sbjct 6025 CAAAAGTTCTGATTATCGACGAGGTTTCGATGGTAGATGGGGACTTGTTTGACAAGCTTG 5966 Query 131444 AAAAAATCGCACAGAGTATTCGATCAAATTCTAGACCATTTGGTGGAATTCAACTAATTC 131503 | |||| || | | |||||| || | | ||||||||||| |||||| ||||| Sbjct 5965 AGCAAATTGCTCGAACGATTCGAAATAACGGTCGCCCATTTGGTGGCATTCAATTAATTA 5906 Query 131504 TCGTTGGAGACTTTTATCAGCTACCACCTGT 131534 || || ||||| | ||| |||||||| || Sbjct 5905 TCACAGGCGACTTCTTTCAACTACCACCAGT 5875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303308011134860