Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1886 149 6e-31 seq1023 107 2e-18 seq8 84.2 2e-11 >seq1886 Length=76891 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| ||||| || |||||||| |||||| | Sbjct 23864 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAC 23805 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||| ||||| |||||| Sbjct 23804 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 23745 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | |||||| | ||||||| Sbjct 23744 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACC 23685 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| || || || ||||| |||||||| Sbjct 23684 TCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | || || ||||||||||||||||| ||| Sbjct 24092 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAG 24033 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| || |||| | |||||| || ||||| || Sbjct 24032 AGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGA 23973 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | |||||| | || |||| Sbjct 23972 ATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACT 23913 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || |||||||||||||| Sbjct 23912 TCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| ||||| | || ||||||||||| |||||||| ||| Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| | ||||||||| ||| | || | |||||| || |||||||| Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | |||||| | || || | Sbjct 24200 ATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACT 24141 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| ||||||||||| || ||||| || ||||| Sbjct 24140 TCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | ||||| || |||||||| || || ||||| || | Sbjct 23636 CCACCACGAAGGCGGAGCACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGAC 23577 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 23576 AGAGTCCTGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 23517 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | |||||||| ||||| | Sbjct 23516 ATGCCTTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACC 23457 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 23456 TCAAGGGTGATGGTCTTGCCGGT 23434 >seq1023 Length=12933 Score = 107 bits (118), Expect = 2e-18 Identities = 246/363 (68%), Gaps = 13/363 (4%) Strand=Plus/Plus Query 46238 TCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGG 46297 ||||||| || | || || ||||| || || |||||||| ||||| |||| || | Sbjct 7194 TCATGCCTGGTTTAACCTTCTCGAACGAACTCATCTCGCGCGATGAGGGTATGCACACCG 7253 Query 46298 ACTTTGCGTG---TCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACCG 46354 |||| || || ||||| || | ||| || | | |||| | | || | | | Sbjct 7254 ACTTCGCCTGCCTTCTCTTCTCTCACA-TCAAGAGT-CGACCAAGT----CCTAAGGCGG 7307 Query 46355 TGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGC 46414 || ||| ||| |||||||| | |||||| ||||||| |||| | |||| ||| Sbjct 7308 TGGAAGCCATCATCACAGAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGCATTGC 7367 Query 46415 CCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGG 46474 | | || | || ||||||||| | | |||||| | |||||||||||||| || | Sbjct 7368 CAGTCGCATTACTTGGCATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTG 7427 Query 46475 ACCGACTGC-TCGTGCAGCTTCACCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGA 46532 |||| ||| || ||| || || | |||| | | |||||| || || ||||| Sbjct 7428 ACCGTTTGCTTCTGGCA--TTGGGCAACAAGAAGTACTATCACGCAACAAACCCGTTTGA 7485 Query 46533 GTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGA 46592 || ||| | |||||||| ||| ||||| || || || ||||| |||||||| || || Sbjct 7486 CTTCATGGAGAACATCTCTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGTGA 7545 Query 46593 GTA 46595 || Sbjct 7546 CTA 7548 >seq8 Length=21116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 1412 CCACCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1471 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| || |||||||| ||| |||| | ||||| |||||||| || Sbjct 1472 AGCGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 1531 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1532 ATGCCCTCCTTGTC 1545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471996692563200