Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq244 140 2e-28 seq1886 98.7 7e-16 >seq244 Length=2820 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2638 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2697 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2698 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2732 >seq1886 Length=76891 Score = 98.7 bits (108), Expect = 7e-16 Identities = 164/234 (70%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||| |||||||| ||||||||||| ||||| || | Sbjct 24094 TACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGG 24035 Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | |||||| || || | || || || ||||| || || || |||||||| Sbjct 24034 AGA----GCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCC 23979 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-T 38263 | ||| | |||||| |||||| || || ||||||||| | | |||||| | || Sbjct 23978 GGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATC-CGACGA 23920 Query 38264 TTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| ||||| | || || || || || || | || || ||||| |||||||| Sbjct 23919 TTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334936055678630