Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1886 102 7e-17 seq1747 82.4 7e-11 >seq1886 Length=76891 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || |||||| | ||||| ||| |||| || | ||||| || || || Sbjct 24094 ATGCAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCA 24153 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | ||| | || | ||| || || || || ||||| || || || Sbjct 24154 GATACTATTGACAACGTCAAGTCTAAGATTCA-GGATAAGGAGGGCATTCCTCCGGATCA 24212 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| |||||||| || || || || | || || | ||| ||||| Sbjct 24213 ACAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAA 24272 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || ||||| ||||| Sbjct 24273 CATCCAAAAGGAGTCAACTCTCCATTTGGTGCT 24305 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGC 25080 ||||||| || ||||||| | || ||||||||||| || |||||||| | ||| Sbjct 23432 TGACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAACGTTAAGT 23491 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| ||||| || || |||||||| ||||| | || || || |||| Sbjct 23492 CGAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCGGGCA 23551 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | ||||| | | ||| || || |||||||| || || || ||||| |||| Sbjct 23552 AGCAGCTCGAAGACGGCAGGACTCTGTCGGACTACAATATCCAGAAGGAGTCCACTCTAC 23611 Query 25201 ATTTAGTGCT 25210 || | ||||| Sbjct 23612 ATCTCGTGCT 23621 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || |||| || | || || ||||| || Sbjct 23638 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCG 23697 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || |||||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 23698 GATACTATCGA--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACC 23755 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || ||||| || | || |||| ||||| || |||||| | Sbjct 23756 AACAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATA 23815 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | ||||| ||||| ||||| || || Sbjct 23816 ACATTCAGAAAGAGTCCACCCTTCA 23840 >seq1747 Length=57527 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || |||||| ||||||| |||| || || ||| ||| |||||| Sbjct 35091 TTCGTCAAGACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAATCGAGTGATACTATC 35032 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| || || || || ||||| || ||||||||||| Sbjct 35031 GA--CAATGTAAAGTCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAACAGCGCT 34974 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || || || || || |||||||| |||| || || | |||| ||||| || || | Sbjct 34973 TGATCTTCGCTGGAAAGCAATTAGAGGATGGCCGGACGCTTAGCGACTACAACATCCAGA 34914 Query 25186 A 25186 | Sbjct 34913 A 34913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313582364950