Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1886 134 1e-26 seq1467 96.9 3e-15 seq8 82.4 6e-11 >seq1886 Length=76891 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || | ||||| || || ||||||| ||||| ||| | | Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || || || |||||||| || ||||| || |||||| Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| ||| || ||||||| |||||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 24046 ATTCAAAAGGAATCTAC 24062 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || | |||||||| || || | | Sbjct 23638 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCG 23697 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| || || || |||||||||||||| || || || ||| Sbjct 23698 GATACTATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAA 23757 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| ||||||| | |||||||| ||| Sbjct 23758 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATAAC 23817 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| ||||| |||||| Sbjct 23818 ATTCAGAAAGAGTCCACC 23835 >seq1467 Length=78481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 260/391 (66%), Gaps = 15/391 (4%) Strand=Plus/Minus Query 130015 TCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTT 130074 |||||||| ||||| || | ||| || | ||||| |||||| || | ||||| || Sbjct 49436 TCGACTCGCTTCATGAAAAGATCTGGAATCCACAAGGCGTAGAAGAGGTCTCGGGCA--- 49380 Query 130075 CTATCCTCGGCAC--CCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGCGTG 130130 | | |||| | || || | | |||| || ||||| ||| | | | || ||||| Sbjct 49379 CGAACCTCCTCCTTGCCGTGATTC-TTTCGGAGATCAAGAAAACTGAAGACATCAGCGTG 49321 Query 130131 CCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTG 130187 ||| || || | || || || | || || ||| || || || |||||||| | Sbjct 49320 CCATGGCTCGAGGTAGATGGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGTCAACATA 49261 Query 130188 GCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGT 130247 ||| | | |||||||||||||| ||||||| | ||||| | || ||||| || Sbjct 49260 GCGAGCAGTGTTGTTGTAGACTCGTAACATTGGTATTAGGCCGTTCGATGTACCGTTCGT 49201 Query 130248 GCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCC 130307 | |||| | ||| ||| |||| | || ||| ||||||| || ||||| | Sbjct 49200 TCCACCAATATATGAACCAGTAGCACGAATGCGGTGGACGTTTAGACCAATACCGCCAGC 49141 Query 130308 AAATTTTGATATCAACGCGCAATCGCGT--AGCGTTTCATAAATGCCAACGATACTGTCT 130365 ||| || |||| || || || | || || ||||||||||| |||| |||||| Sbjct 49140 GGTTTTGGAGATCATGGCACA--CGTTTTCAGTGTGTCATAAATGCCTTCGATGCTGTCT 49083 Query 130366 TCTTTAATGTTTAGGAGGAAACACGAGGCCA 130396 || || |||| | |||||| || |||| || Sbjct 49082 TCCTTCATGTCAATGAGGAAGCATGAGGACA 49052 >seq8 Length=21116 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| ||||| || || ||||| || || || || |||||||| || | || Sbjct 1546 AGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTTGA 1487 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| |||||| ||||||| |||||||| || || || || || Sbjct 1486 GGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGAC 1442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419714034862450