Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1886 179 7e-40 seq1747 134 3e-26 seq1023 105 1e-17 seq2024 87.8 3e-12 >seq1886 Length=76891 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || || ||||| ||||||||||| || ||||| Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || |||||||| |||||||| || || | ||||| || || ||| Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| | ||||||| || || || |||| ||||| ||| Sbjct 24200 ATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACT 24141 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || |||||||| || || || |||||||||||||| ||||| Sbjct 24140 TCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| || |||||||||||||| Sbjct 23864 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAC 23805 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | |||||||| || || Sbjct 23804 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 23745 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | |||||| ||||| || || | ||| || || Sbjct 23744 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACC 23685 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| ||||| ||||||||||| |||||||| Sbjct 23684 TCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || || || ||||| ||||| || |||||| Sbjct 24092 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAG 24033 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | ||||| || || ||| Sbjct 24032 AGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGA 23973 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | ||| || || || || || | ||||| ||| Sbjct 23972 ATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACT 23913 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 23912 TCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||||| |||||||| || ||||| || || || || Sbjct 23636 CCACCACGAAGGCGGAGCACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGAC 23577 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || ||||| | |||||| || ||||| || | | || ||||| || || Sbjct 23576 AGAGTCCTGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 23517 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | ||| ||| ||||| || || | || || || Sbjct 23516 ATGCCTTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACC 23457 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 23456 TCAAGGGTGATGGTCTTGCCGGT 23434 >seq1747 Length=57527 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || |||| ||||| ||||| ||||| || ||||| || Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | |||||||| || |||||||| ||||| || || ||||| | ||| || ||| Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || |||||||| || | |||||||||||| |||||||||||||||||||| Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 35091 >seq1023 Length=12933 Score = 105 bits (116), Expect = 1e-17 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| || || ||||||||||| || || || |||||||||||| | |||||| Sbjct 7567 CATAACACCAGCCTTCTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTTGTCTTGCCTGA 7508 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| ||||||||||||||| ||||| ||| | | | ||| || || Sbjct 7507 CAGAGAGATGTTCTCCATGAAGTCAAACGGGTTTGTTGCGTGATAGTACTTCTTGTTGCC 7448 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 | ||| | | |||||||| || |||||||||||||||| |||||| | ||||| Sbjct 7447 CAATGCCAGAAGCAAACGGTCAGCAACAAACTCGATGTACTGGCACATCAGTTTGGAGTT 7388 Query 10115 CATGCCAA-TCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCT 10158 |||||||| | ||||| | || || ||||| || ||| |||| Sbjct 7387 CATGCCAAGTAATGCGACTGGCAAT-GCGTCTGTAAGGAACTCCT 7344 >seq2024 Length=22204 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 59429 CGGTAGAACAGTTCCTGGACGGATCCAGCAGCGCGCTCAACCCAAGTCTGGTCGGGGC-G 59487 || ||||| || |||||| || || || | | |||||||| ||||| ||| | | Sbjct 4933 CGATAGAAAAGCTCCTGGGTGGCGCCGGCGCCTTGTTCAACCCATGTCTGATCGTTACTG 4992 Query 59488 AACCTCGAAGAACTGGGGGGTCTGCACAATCGCGATCTTGCCGTCATGGGAAAAG-TAGG 59546 | || ||||| ||||| ||||| ||||| || ||||| | ||| | | | | | | Sbjct 4993 ATTCTA-AAGAATTGGGGAGTCTGAACAATTGCAGTCTTGTCATCA-GCTAGATGCTCAG 5050 Query 59547 GCATGATTTCCTTGAGGTAGTCAGGGCGCGGACAGAAGTCAGCATCGAAGATGGCAAAGA 59606 |||| ||||| ||||| | ||||| || || || |||||||||||||| || || |||| Sbjct 5051 GCATTATTTCTTTGAGAAAATCAGGACGAGGGCAAAAGTCAGCATCGAAAATTGCGAAGA 5110 Query 59607 AGGGGGCAGTTGTCTTGGTGAATGCGTTGCGAAGGTTGCCAGCCTTTTT 59655 || | || ||| | | ||| ||||||||| || || ||||| Sbjct 5111 AGTCTCCTGTGGTCCTAGCGAAATTCCAGCGAAGGTTACCGGCTTTTTT 5159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921590949635600