Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1023 168 1e-36 seq1467 84.2 4e-11 >seq1023 Length=12933 Score = 168 bits (186), Expect = 1e-36 Identities = 309/440 (70%), Gaps = 27/440 (6%) Strand=Plus/Plus Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| |||||||| ||||||||| || | ||||| ||||| |||||||| ||| || Sbjct 7128 CCGCGGTCGAGGGTATCTTCTTCAGCGGATCTTTCGCGTCCATTTTCTGGCTTAAGAAGC 7187 Query 42778 A-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 || || ||||| || | ||||||||||||||||||||| | || ||||| || Sbjct 7188 GCGGACTC-ATGCCTGGTTTAACCTTCTCGAACGAACTCATCTCGCGCGATGAGGGTATG 7246 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA-----GGCACAAGCCCTCGA 42891 || | ||||| |||||||| || ||||| ||| ||| | |||| ||| | Sbjct 7247 CACACCGACTTCGCCTGCCTTCTCTTCTC---TCACATCAAGAGTCGACCAAGTCCT--A 7301 Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951 ||| ||| ||||||||||| ||||| || || ||| |||||||||| | | Sbjct 7302 AGG---CGGTGGAAGCCATCATCACAGAGGCGGTTACAATTGAGCAGGAGTTCCTTA--C 7356 Query 42952 AGTCGC--TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 || ||| |||| || | | | ||||||||| | | || |||||| |||||||| | Sbjct 7357 AGACGCATTGCCAGTCGCATTACTTGGCATGAACTCCAAACTGATGTGCCAGTACATCGA 7416 Query 43010 GTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTAC-AACACGC-- 43065 || || || |||| | | | | || || |||| || | ||| | ||||| Sbjct 7417 GTTTGTTGCTGACCGTTTGCTTCTGGCA-TTGGG---CAACAAGAAGTACTATCACGCAA 7472 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | ||| || ||||| |||||||||||||| || |||||||| ||||| ||||||| Sbjct 7473 CAAACCCGTTTGACTTCATGGAGAACATCTCTCTGTCAGGCAAGACAAACTTCTTCGAGA 7532 Query 43126 AGCGCGTCGCCGACTACCAG 43145 ||||||| | ||||||||| Sbjct 7533 AGCGCGTTGGTGACTACCAG 7552 >seq1467 Length=78481 Score = 84.2 bits (92), Expect = 4e-11 Identities = 292/450 (65%), Gaps = 18/450 (4%) Strand=Plus/Minus Query 244999 CTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCT 245058 || ||| | || |||||| || || || ||||| | ||| | ||||||||| | || | Sbjct 49437 CTCGACTCGCTTCATGAAAAGATCTGGAATCCACAAGGCGTAGAAGAGGTCTCGGGCACG 49378 Query 245059 CTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCC 245117 ||| ||| ||| ||| ||||| | || || | ||| ||||| || |||||| Sbjct 49377 AACCTCCTCCTTGCC-GTGATTCTTTCGGAGATCAAGAAAACTGAAGACATCAGCGTGCC 49319 Query 245118 AGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCC 245177 | ||||| | ||||| || | ||| ||||||||||| || || ||||||| || | Sbjct 49318 ATGGCTCGAGGTAGATGGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGT----CAACA 49263 Query 245178 TCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTG 245233 | ||||| |||| ||| || | | || | || |||||| || ||||| Sbjct 49262 TAGCGAGCAGTGTTGTTGTAGACTCGTAACATTGGTATTAGGCCGTTCGATGTACCGTTC 49203 Query 245234 GTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCC 245289 || || || || | || | | | | ||| | ||||| | || | || Sbjct 49202 GTTCCACCAATATATGAACCAGTAGCAC---GAATGC-GGTGGACGTTTAGACCAATACC 49147 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 ||| ||| |||||||| | ||| || | || | ||||| ||||| || ||||| Sbjct 49146 GCCAGCGGTTTTGGAGATCATGGCACACGTTTTCAGTGTGTCATAAATGCCTTCGATGCT 49087 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| |||||||| | || ||||| ||||||| ||| | ||| ||| | || Sbjct 49086 GTCTTCCTTCATGTCAATGAGGAAGCATGAGGACATCTGTGCAGAGGGCGTGCCGGCATT 49027 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| || ||||| || || |||||||| Sbjct 49026 GAATAGTGTGGGCGAAGCATGAGTAAAGTA 48997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944306974424800