Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1886 145 2e-29 seq1747 136 9e-27 seq1044 113 1e-19 >seq1886 Length=76891 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || ||| ||||| || || ||||||| | Sbjct 24092 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAG 24033 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | || || || || ||||| ||||||||||| ||| ||| Sbjct 24032 AGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTG---ATCCGGG 23976 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| || | ||||| || || |||| ||| |||||| Sbjct 23975 GGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCG 23916 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 23915 ACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||||| || || || ||||| || || || || || ||||| Sbjct 24284 TCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAA 24225 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||||||| || || || || |||||||| || || | || ||||| Sbjct 24224 ATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTG 24165 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| ||||| ||||| | || || || || ||||| |||||||||||| Sbjct 24164 TCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACG 24105 Query 288463 AATATCTGCAT 288473 ||||| ||||| Sbjct 24104 AATATTTGCAT 24094 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| ||||| || || ||||| |||| Sbjct 23864 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAC 23805 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| || || || | || || || |||||||||||||||||||| ||||| Sbjct 23804 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGG---TCTGGA 23748 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || |||||||| |||| || || || || |||| ||| || || Sbjct 23747 GGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCG 23688 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| || ||||||||||| |||||||| Sbjct 23687 ACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 >seq1747 Length=57527 Score = 136 bits (150), Expect = 9e-27 Identities = 140/182 (77%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| ||||| || || || |||||||| ||||| ||||||||| Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 | |||||||| || ||| || || || ||||||||||| |||| || || || Sbjct 34973 AAGCGCTGTTGG---TCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTG 35029 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| ||||||||||| ||||| ||||| || || || || || ||||||||| Sbjct 35030 TCGATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACG 35089 Query 288463 AA 288464 || Sbjct 35090 AA 35091 >seq1044 Length=7244 Score = 113 bits (124), Expect = 1e-19 Identities = 202/288 (70%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC-A 326022 ||||||||||||||||| | | ||| ||||||| ||||| || ||| | ||||| | Sbjct 2971 ACGATAGGCGTGATGAATTCCATCAGGAACCCTTCAATTTTAAGCAGACTGGGGAATTGA 2912 Query 326023 GCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 326082 || || | ||||| |||| ||| || ||| ||| | || ||| |||| ||||| Sbjct 2911 ACT-TGAAGGAAGTTGATGAGGAGGCCTTTAATATGACTCCCATCATGATCCTGATCGGT 2853 Query 326083 CATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTG 326142 ||||||||||| ||| ||||| || || ||||| |||| |||| | || Sbjct 2852 CATGATCATCAAATGGCCGTACCGGAGACTCTTTGTGTCAGTGTATTCTTTTTTGTGCTG 2793 Query 326143 AAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCAC 326199 ||||| | || | |||| | ||| |||||| | ||||||| || ||| | | Sbjct 2792 CAGGCCCATAAACTTCTTGATGTTCTG-GATTTCCTGATTCTTCGAAAT--TTGATCAAT 2736 Query 326200 GGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247 |||||||| || ||||| | || ||||||||||||||||| || || Sbjct 2735 TGATGCATCACGAACGTTGAGCAGCTTTCCACGAAGAGGGAAGACACC 2688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179613137900940