Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1044 107 4e-18 seq1023 100 6e-16 >seq1044 Length=7244 Score = 107 bits (118), Expect = 4e-18 Identities = 201/288 (70%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC-A 298143 ||||||||||||||||| | | ||| ||||||| ||||| || ||| | ||||| | Sbjct 2971 ACGATAGGCGTGATGAATTCCATCAGGAACCCTTCAATTTTAAGCAGACTGGGGAATTGA 2912 Query 298144 GCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 298203 || || | ||||| |||| ||| || ||| ||| | || ||| |||| ||||| Sbjct 2911 ACT-TGAAGGAAGTTGATGAGGAGGCCTTTAATATGACTCCCATCATGATCCTGATCGGT 2853 Query 298204 CATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTG 298263 ||||||||||| ||| ||||| || || ||||| |||| |||| | || Sbjct 2852 CATGATCATCAAATGGCCGTACCGGAGACTCTTTGTGTCAGTGTATTCTTTTTTGTGCTG 2793 Query 298264 AAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCAC 298320 ||||| | || | |||| | ||| |||||| | ||||||| || ||| | | Sbjct 2792 CAGGCCCATAAACTTCTTGATGTTCTG-GATTTCCTGATTCTTCGAAAT--TTGATCAAT 2736 Query 298321 GGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC 298368 |||||||| || || || | || ||||||||||||||||| || || Sbjct 2735 TGATGCATCACGAACGTTGAGCAGCTTTCCACGAAGAGGGAAGACACC 2688 >seq1023 Length=12933 Score = 100 bits (110), Expect = 6e-16 Identities = 179/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||||||| || ||| || || |||| ||| || ||||| ||| | | || Sbjct 7316 ATCATCACAGAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGC-ATTGCCAGTCGC 7374 Query 243562 CTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||||||||||| |||| ||| | ||||||||||| || || || ||||| | Sbjct 7375 ATTACTTGGCATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTGACCG--T 7432 Query 243621 TTTCATCGCGC-TTGGTTATGAGAAAGT-GTACAACTCCAAGAACCCCTTTGCCTTTATG 243678 || | || || |||| | | |||| || || | | ||||| |||| ||| ||| Sbjct 7433 TTGCTTCTGGCATTGGGCAACAAGAAGTACTATCACGCAACAAACCCGTTTGACTTCATG 7492 Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 ||| ||| || || ||| || || ||||||||||| ||||| || |||| || || Sbjct 7493 GAGAACATCTCTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGTGACTACCAG 7552 Query 243739 CGCCCTGGTGTGATG 243753 ||||||| ||| Sbjct 7553 AAGGCTGGTGTTATG 7567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102841423325500