Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1886 102 9e-17 >seq1886 Length=76891 Score = 102 bits (112), Expect = 9e-17 Identities = 172/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 41967 ATATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGA 42026 ||||| | || |||| || | || ||| | ||||||||| | || ||||||||| Sbjct 24335 ATATTCCTCTACTGACCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGG 24276 Query 42027 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 42086 || ||||| || | || || || |||| || | |||||| || ||||| || || ||| Sbjct 24275 ATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGC 24216 Query 42087 TGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACC-G 42144 || || || | || | || |||||| ||| ||| | || | |||| ||| | || | Sbjct 24215 TGTTGATCCGGAGGAATGCCCTCCTTATCC-TGAATCTTAGACTTGA-CGTTGTCAATAG 24158 Query 42145 TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTT 42204 | || ||||| || || | || ||||||||||| ||||| ||||| || || |||| Sbjct 24157 TATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTT 24098 Query 42205 GCAT 42208 |||| Sbjct 24097 GCAT 24094 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||| | ||| | ||| |||||| || |||||||| || | |||||||| |||| || Sbjct 23619 CACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCTTC 23560 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| || | ||||||||||| | || | || ||||||||| | Sbjct 23559 GAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC-T 23501 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 | | || | | | ||| | | | || ||| ||| ||||| || | |||||||| | Sbjct 23500 GGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGTCT 23441 Query 42178 TGCCCGT 42184 |||| || Sbjct 23440 TGCCGGT 23434 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| || | || || || | || || |||||||| || || || Sbjct 24056 TCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAG 23997 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||| || || | || | || ||||||||| ||| || || | | Sbjct 23996 ATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTA 23937 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || |||||| || |||| |||||||| || || || |||||||| || Sbjct 23936 TCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACG 23877 Query 42198 AAGATTTGCAT 42208 || || ||||| Sbjct 23876 AAAATCTGCAT 23866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543194262863200