Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1467 187 2e-42 >seq1467 Length=78481 Score = 187 bits (206), Expect = 2e-42 Identities = 339/489 (69%), Gaps = 8/489 (2%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGAC-CCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GA 93955 || || || ||||| || || || ||| ||| ||||||||| || || ||||| || || Sbjct 49015 CCCACACTATTCAATGCCGGCACGCCCTCTGC-ACAGATGTCCTCATGCTTCCTCATTGA 49073 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||| |||| || |||| |||| || || ||||| | |||| Sbjct 49074 C-ATGAAGGAAGACAGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCT 49132 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| ||| || || || || | | |||||| | | ||||| | ||||| || | Sbjct 49133 CCAAAACCGCTGGCGGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCATATA 49192 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | | || || || || || || |||||||| | || ||| | || |||| ||||||| Sbjct 49193 TTGGTGGAACGAACGGTACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAACA 49252 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || ||||| || ||||||||||| | | || ||| | || || |||| |||| Sbjct 49253 CTGCTCGCTATGTTGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTCG 49312 Query 94196 AGCCCTGGCACGCGGACG--TGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||| |||||||| || | | ||| ||| | || || |||||||| |||||||| || Sbjct 49313 AGCCATGGCACGCTGATGTCTTCAG--TTTTCTTGATCTCCGAAAGAATCACGGCAAGGA 49370 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| |||||||||||||||| | ||| | ||||| ||||| ||||| || Sbjct 49371 GGAGGTTCGTGCCCGAGACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAGCG 49430 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||| |||| ||||| ||||| || || || ||| ||| || || | || Sbjct 49431 AGTCGAGCAAAATGGTAGCTGGACACTTTTCTGCCCTAACGAAGCTCCTGGTTTGGCAGA 49490 Query 94374 CGTTTGTGG 94382 |||| ||| Sbjct 49491 TGTTTATGG 49499 Score = 93.3 bits (102), Expect = 4e-14 Identities = 196/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 95075 AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGA 95134 || ||||||| ||| | || ||||| || ||||||||||| || ||||| | |||| Sbjct 50232 AATACGGTGTCCGCAACTCCCTCCTTGTTGCGCCCATGCCCACAGCTTCCACCTCCCAGA 50291 Query 95135 TCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGC 95194 | || |||||||| || | ||||| || | |||||| || | ||| | || |||| Sbjct 50292 TTCTGGGCAACAATGAATGCTTCGAGCCTTACACCTCTAATATTTACTCACGCCGTGTGC 50351 Query 95195 TCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGT 95253 | || || ||||||| ||| ||||| | |||||| |||| || | | ||||| Sbjct 50352 TAGCAGGTGAATTCCAGGTCGTCAACCCGTGGCTCCTAAAAGACCTTGTTGAC-ATGGGT 50410 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC 95313 | ||| || || | || |||| | || || | ||||| ||||| || Sbjct 50411 CTTTGGTCCGATAACATGAAAAACCGCATTATAGCCGACGGTGGCTCTATCCAGCGGATT 50470 Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 || | || || || || || || || ||||||||||| || ||||| || Sbjct 50471 CCAAACATTCCTGACGATATTAAAGCTCTCTACAAGACAGTCTGGGAAAT 50520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706317570800