Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1023 109 5e-19 seq1467 91.5 1e-13 seq1886 84.2 2e-11 >seq1023 Length=12933 Score = 109 bits (120), Expect = 5e-19 Identities = 162/226 (72%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 |||||||| | || || ||||||| |||| | ||| |||| |||| | || ||| Sbjct 7325 GAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGCATTGCCAGTCGCATTACTTGGC 7384 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTG-TTGGTGCA 52732 |||||| | | |||||| |||||||||||||||| || || ||| || || ||| Sbjct 7385 ATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTGACCGTTTGCTTCTGGCA 7444 Query 52733 GCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791 | ||||| | | ||||||| |||| || |||||||| || ||| | ||||| | Sbjct 7445 --TTGGGCAACAAGAAGTACTATCACGCAACAAACCCGTTTGACTTCATGGAGAACATCT 7502 Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | || |||||||| ||||| ||||||||||| || || || || Sbjct 7503 CTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGTGACTA 7548 >seq1467 Length=78481 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 153596 GGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTC 153655 ||||| |||||| ||||||||||| ||| || |||| | |||||| | ||||| Sbjct 49810 GGCAAGAGACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATAATCTC 49751 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| || ||| || || |||| ||| | ||| ||||| || |||||||| Sbjct 49750 TGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGATTGCA 49691 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGA 153765 ||||||||| |||||||||| || |||||||||| ||| | |||| Sbjct 49690 GGCGTCTTTGTAGAGCATGTATGGGTTGCCGGTCTCGGTTTGGGCCTCGA 49641 >seq1886 Length=76891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||||||||||||| | || || ||||| || || || || | | Sbjct 24059 GATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCA 24000 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||| ||||| || || ||||| ||||| ||| || || | Sbjct 23999 AAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACA 23940 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || || | ||| || || |||| || | || || || || || || || Sbjct 23939 TTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTA 23880 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 23879 ACGAAAATCTGCAT 23866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496245465045600