Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1886 104 2e-17 seq1747 98.7 7e-16 >seq1886 Length=76891 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || ||||| |||||||| ||| || ||| |||| || Sbjct 24302 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 24243 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || || ||||| ||| | |||| ||||||||| || ||||| || ||||| || | Sbjct 24242 AACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGA 24183 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || || | || |||||||| | ||| || || || ||||||||||| Sbjct 24182 ATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTG 24123 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || ||||||||| Sbjct 24122 CCGGTTAGAGTCTTGACGAATATTTGCATA 24093 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || Sbjct 24074 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCA 24015 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| || | || | ||||||||| || ||||| ||||||||||| Sbjct 24014 AGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGG 23955 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || |||||||| ||| || || | || ||||| || Sbjct 23954 ATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTT 23895 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || ||||| |||||| Sbjct 23894 CCGGTGAGCGTCTTAACGAAAATCTGCATA 23865 >seq1747 Length=57527 Score = 98.7 bits (108), Expect = 7e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 14989 TTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15048 || || |||||||| ||||| || | | | || |||||||| || |||||| | ||| Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 15049 AAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCT 15108 || ||||||||||| ||||| || ||||| || || || |||||| | || Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 15109 ATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15167 |||||||| || |||||| || | ||| ||||||||||| || || || || || || Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357380108898050