Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1886 114 1e-20 seq1467 95.1 1e-14 >seq1886 Length=76891 Score = 114 bits (126), Expect = 1e-20 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA--TCG 45188 ||| | ||| || ||||| ||||||||||| || || ||| || || || | || Sbjct 24303 CACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCG--GAAAGTGTTCGGCCGTCC 24246 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||| || || || ||| | |||| || || || ||||| |||||||| || ||||| Sbjct 24245 TCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCC 24186 Query 45249 TGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| || |||| || | || | || || ||||| || ||||| | ||||| || Sbjct 24185 TGAATCTTAGACTTGA-CGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGT 24127 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||||||| || || || |||||||| Sbjct 24126 TTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 >seq1467 Length=78481 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| |||| | ||| ||| ||||| | || |||||||||||||||||||||||||| Sbjct 49637 ATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAAAGACGCCTGCAAT 49696 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 |||| | ||| |||| || ||||||| || | ||||||||| | || ||| Sbjct 49697 CGGAAGAGCAACCAGAAGAATCTGGGAACTATTCGCAGCTCCAATCTTTGCACAGAGATT 49756 Query 123708 ATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754 ||||| |||| | |||| ||||||| || |||||| | || || Sbjct 49757 ATCGAGTACACAGCACCCGACGAAGTGGCTGTCTGTAATCTTGCGTC 49803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451987775390800