Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1467 104 3e-17 seq1023 93.3 5e-14 >seq1467 Length=78481 Score = 104 bits (114), Expect = 3e-17 Identities = 449/705 (64%), Gaps = 14/705 (2%) Strand=Plus/Minus Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| ||||| ||||| |||||||| |||| || |||| ||||| |||||||||||| Sbjct 50325 GTGTAAGGCTCGAAGCATTCATTGTTGCCCAGAATCTGGGAGGTGGAAGCTGTGGGCATG 50266 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCC-ACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033 || || | || ||| |||||||| ||| | ||| || | ||||||| | || Sbjct 50265 GGCGCAACAAGGAGGGAGTTGCGGACACCGTATTGGGCTA-TGGATGCCTTGAGTGAATC 50207 Query 116034 CCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTGGAGGATACCTTG 116090 |||||| | || | ||| | | |||||| || | ||||||||||| || Sbjct 50206 CCAGTCCCAA---AGGTCTGTGGGAGTGACATTCCACATGTCGTATTGGAGGATACCCTG 50150 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 || | ||||| || || | || |||| || || | | || | ||| || Sbjct 50149 AGAAACAGGCGAGCCTTCGTAGGTAGCATAAGGACCAAGTTCTTTAGCAAGCTCGCAGGA 50090 Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210 | ||| || ||||| || || ||||| ||||| || || | ||||||||| Sbjct 50089 TGAGGTGAGCGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGCTTCTTGGCCTC 50030 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 ||||| || | ||||| || || |||| || ||||| ||||| || || Sbjct 50029 TGGAGAATCGAAAGGAAGACGAAGAGCAAGGAAGGCATCAGCAAGACCCTGGACGCCAAG 49970 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCT 116330 ||||| || ||||| | | || ||||| || || || ||| || Sbjct 49969 ACCAATGGGCCGATGACGGAAGTTGCTGCGGCGAGCCTCTTCGACAGGGTAATGGTTGAC 49910 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| | |||| ||||| || || || | | ||| || | ||| | | Sbjct 49909 TTCGATGATTTTATTGAGATTGCGAGTCACGACTTGGACTACTTCGTGCAACTTGGCAAA 49850 Query 116391 ATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 |||| | || ||| | | || || || || ||||| | ||||| ||||| Sbjct 49849 ATCATATTCACCACGATTGTAGTCCACGAAGGAC---GGGAGGGCAAGAGACGCAAGATT 49793 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 ||| |||| || || | |||||||| ||||| || || || | ||| || || Sbjct 49792 ACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATAATCTCTGTGCAAAGATTGGAGCT 49733 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 ||| || |||| ||||| || || ||| || || || || ||||||||||| Sbjct 49732 GCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGATTGCAGGCGTCTTTGTAGAGCAT 49673 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||| | || ||||| ||||||| || |||||| || | ||| Sbjct 49672 GTATGGGTTGCCGGTCTCGGTTTGGGCCTCGAGAATGGCGTACCA 49628 >seq1023 Length=12933 Score = 93.3 bits (102), Expect = 5e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | |||||| || || ||||||||||| ||||||||| | ||| |||||||| || Sbjct 7249 GTGCATACCCTCATCGCGCGAGATGAGTTCGTTCGAGAAGGTTAAACCAGGCATGAGTCC 7190 Query 127591 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 127649 |||||||| | ||||||||| | | | ||| || || ||||||||| ||||| || Sbjct 7189 GCGCTTCTTAAGCCAGAAAATGGACGCGAAA-GATCCGCTGAAGAAGATACCCTCGACCG 7131 Query 127650 ACGCGAACGC 127659 |||||||| Sbjct 7130 CGGCGAACGC 7121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613486264066800