Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1886 122 2e-22 seq8 100 7e-16 seq1747 87.8 4e-12 >seq1886 Length=76891 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| ||||||||||||| ||||||||| | | || | || || |||| |||| Sbjct 24296 TGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGC 24237 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || |||||||| || |||||||| || |||||| ||| || || ||||||||||| Sbjct 24236 TTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTA 24177 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | || |||| | ||| || ||||| || || || || || || Sbjct 24176 GACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTT 24117 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||| Sbjct 24116 AGAGTCTTGACGAATATTTG 24097 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| || |||||||| | ||||||||| | | || | ||||| Sbjct 24077 AGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCC 24018 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||||||||| || ||||| ||| ||||| ||| Sbjct 24017 TCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 23958 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | || || | | ||| || || | ||||| ||| Sbjct 23957 TGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTC 23898 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| || Sbjct 23897 TTTCCGGTGAGCGTCTTAACGAAAATCTG 23869 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || ||||| |||||||| |||| |||||||| | || |||| Sbjct 23630 CGAAGGCGGAGCACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTC 23571 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || ||||| |||||||| || |||||||| | ||||||||||| || || ||| Sbjct 23570 CTGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCT 23511 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| || || | | || || || | Sbjct 23510 TCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGG 23451 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 23450 GTGATGGTCTTGCCGGT 23434 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || ||||| || || | ||| || || | || || | ||||| Sbjct 23849 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCC 23790 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| |||||||| ||||| ||| || || || ||| Sbjct 23789 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCC 23730 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| || || | || || || || | || || ||| Sbjct 23729 TGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTC 23670 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 23669 TTTCCGGTGAGTGTCTTGACGAAGATCTG 23641 >seq8 Length=21116 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||||||||||||||| |||| ||||||||| | | || Sbjct 1418 CGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTG 1477 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || || ||||| ||||||||||| || ||||| |||||||| Sbjct 1478 CGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGG 1527 >seq1747 Length=57527 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAA-GTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||| |||| ||||||||| || || |||| ||||| || | |||||||| |||||| Sbjct 34911 CCTTCTGGATGTTGTAGTC-GCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAG 34969 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | ||||| |||||||| ||| || || ||||| ||||| ||| || Sbjct 34970 ATCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTG 35029 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 |||| || || | | |||||| || | ||||| || ||||||||||| || || || Sbjct 35030 TCGATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACG 35089 Query 199619 AA 199620 || Sbjct 35090 AA 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178880363532910