Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1886 136 4e-27 seq1747 98.7 1e-15 seq8 98.7 1e-15 >seq1886 Length=76891 Score = 136 bits (150), Expect = 4e-27 Identities = 145/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | || |||||| |||||||||||||| || ||||| | |||| || Sbjct 23619 CACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCTTC 23560 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| ||||| ||||||||||||||||| | ||| | || ||||||||| Sbjct 23559 GAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 23500 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | || ||| ||| ||||| || | |||||||| | Sbjct 23499 GATCTTCGACTT-AACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGTCT 23441 Query 46563 TGCCCGTCA 46571 |||| |||| Sbjct 23440 TGCCGGTCA 23432 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||| | ||||| ||| | || |||||||||||| ||||||||||| Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || | ||||||||||||||| |||| ||||| || || | || Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | || |||||| ||| ||||| ||||| ||| | | | || || ||||| || Sbjct 24200 ATGCCCTCCTTATCCTGAATCTTAGACTTGA-CGTTGTCAATAGTATCTGAAGATTCAAC 24142 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || ||||||||||| || || || || || || |||||||| Sbjct 24141 TTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || ||||||||||| || || || | || || ||||||||||| || || Sbjct 24056 TCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAG 23997 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| || || | || | || ||||||||| |||||| ||| | | Sbjct 23996 ATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTA 23937 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || |||||| || || | |||||||| || || || ||||| ||||| Sbjct 23936 TCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACG 23877 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 23876 AAAATCTGCAT 23866 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || || || ||||| || ||||| | || || ||||||||||| ||||| Sbjct 23829 CTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 23770 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | | |||||||||| ||||||| ||||| | Sbjct 23769 GATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATT 23710 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || || || || || | || ||||| || || || || || || || Sbjct 23709 GTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGAC 23650 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 23649 GAAGATCTGCAT 23638 >seq1747 Length=57527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || || || | || || | ||||| || ||||| | Sbjct 34911 CCTTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGA 34970 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||||||||| ||||| | || | || |||||| ||| ||||||| ||| | | Sbjct 34971 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGT 35030 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || || |||||||| || || | ||||||||||| ||||| || || || || | Sbjct 35031 CGATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGA 35090 Query 46584 AG 46585 || Sbjct 35091 AG 35092 >seq8 Length=21116 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| || || |||||||||||||| Sbjct 1447 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAA 1506 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||| ||||| | || | || ||||||||| Sbjct 1507 GATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 1545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565219111239600