Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1886 120 3e-22 seq1023 98.7 1e-15 seq8 96.9 3e-15 >seq1886 Length=76891 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || || |||||||| |||| ||||| | | Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || |||| ||||| || || |||||| | || ||| Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | |||||||| ||||| || || | || || ||| |||||||||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||||||| | || || || |||||||| ||| Sbjct 24046 ATTCAAAAGGAATCTACTCTTCACTTGGTGCTCCGT 24081 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || || || ||||||||||| || | || || || | | Sbjct 24094 ATGCAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCA 24153 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || || || | || || ||||| ||||| | || || Sbjct 24154 GATACTATTGACAACG-TCAAGTCTAAGATTCAGGATAAGGAGGGCATTCCTCCGGATCA 24212 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| ||| ||||| ||| |||| |||| || || || ||||||||| Sbjct 24213 ACAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAA 24272 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||||||||||| ||| | | ||||| Sbjct 24273 CATCCAAAAGGAGTCAACTCTCCATTTGGTGCTTCGTCTACGTGGCGG 24320 >seq1023 Length=12933 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || |||||| |||| ||||| || | || ||||||||||| ||| || || Sbjct 7264 GCAGGCGAAGTCGGTGTGCATACCCTCATCGCGCGAGATGAGTTCGTTCGAGAAGGTTAA 7205 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| ||||| || || ||||| || |||| |||||| || ||||| Sbjct 7204 ACCAGGCATGAGTCCGCGCTTCTTAAGCCAGAAAATGGACGCGAAAGATCCGCTGAAGAA 7145 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCTTTGCTGG 133072 || |||||||| || ||||| || || | ||| |||| || | ||||| | || Sbjct 7144 GATACCCTCGACCGCGGCGAACGCGACTAAGCGAGATGCGAAGGTAGAGTTCTTATC-GG 7086 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||| || || ||||| |||||||| Sbjct 7085 ATATCCATCGAAGAGCCCAATCGGCCTT 7058 >seq8 Length=21116 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| | ||||||||||| || || | ||| ||||| || || || Sbjct 1545 GACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTTGAG 1486 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| ||||| |||| || || | || || Sbjct 1485 GACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTC 1426 Query 38457 CGT 38459 ||| Sbjct 1425 CGT 1423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500155731603200