Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1396 111 6e-19 seq1886 102 3e-16 >seq1396 Length=82093 Score = 111 bits (122), Expect = 6e-19 Identities = 275/414 (66%), Gaps = 5/414 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| || ||||| | | || || || || |||||||| | || || || Sbjct 61664 GGAAAGCCAGTGATCCAAGTCGAGTTCAAGGGCGAGACGAAAACTTTCACACCAGAGGAG 61723 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||||| | || || ||| ||||| || || ||| |||| || Sbjct 61724 ATCTCTTCGATGGTCTTGACGAAGATGCGGGAAACTGCCGAGTCATACCTTGGCGGCACA 61783 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | |||| || | |||||||| ||||| ||||| ||| | || || |||||||| Sbjct 61784 GTCAACAATGCTGTCGTCACTGTTCCTGCTTACTTCAACGATTCTCAGCGACAAGCAACA 61843 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | |||||||| | || ||||||||||| || || ||||| || || Sbjct 61844 AAGGATGCTGGTCTGATTGCTGGCCTTAACGTTCTTCGAATAATCAACGAACCCACTGCT 61903 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGT 451491 || ||| | || || || | ||| | | |||| ||| | || || | | | Sbjct 61904 GCCGCTATCGCGTACGG-TTTGGACA---AGAAGACAACTGGCGAGCGCAACGTCCTCAT 61959 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || || | ||||| ||||| ||| ||| | ||| | ||||| || || | || Sbjct 61960 CTTCGACCTGGGTGGTGGAACATTCGATGTCTCTCTTCTTACCATTGAGGAGGGTATCTT 62019 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||| | || |||||||||||| | || ||||| || |||| || Sbjct 62020 CGAGGTTAAGTCGACTGCTGGTGATACTCACTTGGGTGGTGAGGACTTTGACAA 62073 >seq1886 Length=76891 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || || || || || || ||||| || || ||||| || Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || || || || || |||||||| ||||| || |||||| Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || ||||| ||||| |||| | | || || || Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || |||||||| || Sbjct 24046 ATTCAAAAGGAATCTACTCTTCACTTGGT 24074 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||| || || || || ||||||||||| || || ||||| Sbjct 23638 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCG 23697 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || || || || ||||| || || ||||| || ||| Sbjct 23698 GATACTATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAA 23757 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || ||||| ||||| | || || | |||||||| Sbjct 23758 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATAAC 23817 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | || |||||| Sbjct 23818 ATTCAGAAAGAGTCCACCCTTCAC 23841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975649293074840