Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1396 154 1e-31 seq1595 116 3e-20 seq108 102 6e-16 >seq1396 Length=82093 Score = 154 bits (170), Expect = 1e-31 Identities = 596/929 (64%), Gaps = 17/929 (2%) Strand=Plus/Minus Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 |||||||||||| ||| ||||||| || | | || || || || | || | || Sbjct 62712 CGTTCACCCTCGTAAACTTGGATAAGCACACCGGGCTGGTTGTCGGAGAACGTGGAGAAG 62653 Query 517448 ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCA 517507 || ||| || || || || || ||||| | | ||||| | ||||||| |||| Sbjct 62652 ACCTCGGACTTCTTCGTGGGGATGGTGGTGTTGCGCTTAATAAGAGGAGTCATAACACCA 62593 Query 517508 CCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAA 517565 || || || || | ||||||||| | |||| |||||| | | | ||| | || | | Sbjct 62592 CCGGCGGTCTCAATACCAAGAGACAACGGAGCGACATCGAGCAACAGAATCTCGTTGGTA 62533 Query 517566 GTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | || || || | | |||| ||||| || || || | ||| || ||||| |||||| Sbjct 62532 GACTTGGATGAGGTGTCACCAGACAGAATGGCAGCCTGGACAGCGGCGCCATAGGCAACA 62473 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 || ||||| || || | | | ||| | | ||||| ||||| || | || | | Sbjct 62472 GCCTCATCGGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGAAGTCGGAGACCATC 62413 Query 517685 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| | |||||| ||||||| || || || || | || || || || || || Sbjct 62412 T-TCTGGATCTTAGGGATACGAGTGGAGCCGCCGACAAGAACGATCTCGTGAACAGAGGA 62354 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAA 517803 || || | || | || | || || || || || | | || || | Sbjct 62353 CTTGTCGATCTTGGCGTCGCGCAGGACACGCTCTACAGGCTCCATGGTTGATCGGAAGAG 62294 Query 517804 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 517863 ||| |||||||| || || ||| | ||| | || | | ||||||| || || Sbjct 62293 GTCCTGGCAAAGTTCCTCAAAGCGAGCACGAGTGATAGAGGTGTAGAAATCAATGCCCTC 62234 Query 517864 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 517923 | | | || || | |||||| | || || | || || || || | || ||||| | Sbjct 62233 GTAAAGGGAGTCGATTTCAATTGATGTCTGGGCGGATGAGGAGAGGGTGCGCTTAGCTCT 62174 Query 517924 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTA 517981 ||| || || |||| ||| | || | || || |||| | ||| || | ||| Sbjct 62173 TTCGCAAGCAGTCCGTAGACGACGGAGAGCACGAGC--ATTGGCAGTCAGGTCCTTCTTA 62116 Query 517982 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 518041 | |||| |||||| || | || | | || || || || ||||| || ||||| Sbjct 62115 TGCTTTCGCTTGAACTCATTGACGAAGTGGTTCACGAGGCGGTTGTCAAAGTCCTCACCA 62056 Query 518042 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 518101 ||||| | ||||| || | || | | || | ||| | || || |||| | | | Sbjct 62055 CCCAAGTGAGTATCACCAGCAGTCGACTTAACCTCGAAGATACCCTCCTCAATGGTAAGA 61996 Query 518102 AGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT----TT 518157 |||| ||||| ||||||||||||| || || || || || || || || Sbjct 61995 AGAGAGACATCGAATGTTCCACCACCCAGGTCGAAGATGAGGACGTTGCGCTCGCCAGTT 61936 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 ||||| || || | ||| ||||| | ||| |||||||| ||||| || || |||| Sbjct 61935 GTCTTC----TTGTCCAAACCGTACGCGATAGCGGCAGCAGTGGGTTCGTTGATTATTCG 61880 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | ||| ||||| |||||||| || ||||| || || ||||||| || |||||||| Sbjct 61879 AAGAACGTTAAGGCCAGCAATCAGACCAGCATCCTTTGTTGCTTGTCGCTGAGAATCGTT 61820 Query 518278 AAAATATGCAGGAACAGTAATAACGGCAT 518306 || || ||||||||||| | || |||| Sbjct 61819 GAAGTAAGCAGGAACAGTGACGACAGCAT 61791 >seq1595 Length=41409 Score = 116 bits (128), Expect = 3e-20 Identities = 197/283 (70%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||| ||| ||||| | |||| || | ||||| | || ||| | | Sbjct 9101 TATCGAAATCTTGACCGCCCAAATGGGTATCACCCGCAGTAGCCTTGACAGTGAACACAC 9160 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | ||| | | | |||| |||||| || |||||||||| || | || || | Sbjct 9161 CTCCTTGGATATGAAGGAGAGACACATCAAAAGTACCACCACCCAAGTCGTAGATGAGCA 9220 Query 518145 CATTCATTTCTTTGTCTTGGTTTTT--ATCA-AGACCATACGCAAAAGCAGCAGCAGTTG 518201 | ||| | ||||| || ||| ||| ||||||||||||| ||| |||||||| | Sbjct 9221 CGTTCCTCTCTTTCTCAGACTTTCCGGATCCGAGACCATACGCAATAGCGGCAGCAGTGG 9280 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | |||||||| || | | || || |||||||||||| |||||||| || ||||||| Sbjct 9281 GCTCATTAATGATACGGAGGACGTTTAGACCAGCAATTGCACCTGCATCCTTGGTGGCTT 9340 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||| || |||||| || ||||| || || ||||| || || Sbjct 9341 GTCGCTGGTTATCGTTGAAGTATGCCGGCACGGTAATGACAGC 9383 >seq108 Length=26577 Score = 102 bits (112), Expect = 6e-16 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| ||| |||||||| ||| || |||| |||||||||||||| ||||||||| | ||| Sbjct 19213 TTAAAAGGGAAAGAAGGCCGTCTTCGAGGCAATTTGATGGGAAAGCGTGTCGATTTCTCT 19154 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 || |||||||| ||||| ||||| || | | || | |||||||||||||| | Sbjct 19153 GCTCGTACAGTCATTACGGGCGATCCTAACCTGTCCCTAGACGAAGTTGGTGTTCCGCGA 19094 Query 668969 ATTATTGCT 668977 | |||||| Sbjct 19093 AGCATTGCT 19085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780686928407380