Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1467 113 6e-20 >seq1467 Length=78481 Score = 113 bits (124), Expect = 6e-20 Identities = 391/609 (64%), Gaps = 11/609 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | || || ||||| ||||||||||| | Sbjct 48907 CCACAGCACATGCTCATGCGTGTTGCCGTTGGCATTCATGGCGAAGATATTGAGAAAGCA 48966 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||||| | |||||| || | || || | || || || ||| Sbjct 48967 CTAGAGACGTACGATTATATGTCCAACAAATACTTTACTCATGCTTCGCCCACACTATTC 49026 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || || || || || | || |||||| || ||||| |||| | ||||| || Sbjct 49027 AATGCCGGCACGCCCTCTGCACAGATGTCCTCATGCTTCCTCATTGACATGAAGGAAGAC 49086 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGGC 111847 ||| | |||||||| | ||| |||||| |||||| ||||| || || Sbjct 49087 AGCATCGAAGGCATTTATGACAC----ACTGAAAACGTGTGCCATGATCTCCAAAACCGC 49142 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 ||| ||||| || | || |||| | | || | || |||| | || || Sbjct 49143 TGGCGGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCATATATTGGTGGAAC 49202 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| ||| | || | || |||||| | || || | ||| ||| || ||||| Sbjct 49203 GAACGGTACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAACACTGCTCGCTA 49262 Query 111968 TGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 ||| |||| | |||| | || || | | || |||| || ||||||||||| Sbjct 49263 TGTTGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTCGAGCCATGGCA 49322 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| ||| || | || ||||| | || || || || | ||||||| || Sbjct 49323 CGCTGATGTCTTCAGTTTTCTTGATCTCCGAAAGAATCACGGCAAGGAGGAGGTTCGTGC 49382 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| || ||||||| ||| | |||||||||||||| ||||||||| |||| ||| | | Sbjct 49383 CCGAGACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAGCGAGTCGAGCAAAA 49442 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| | ||| | || || || || || | || || ||| | | |||| || || Sbjct 49443 TGGTAGCTGGACACTTTTCTGCCCTAACGAAGCTCCTGGTTTGGCAGATGTTTATGGCGA 49502 Query 112205 GGAGTTTGA 112213 |||||||| Sbjct 49503 CGAGTTTGA 49511 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | || |||||| || | ||||||||||| || | ||||| ||||| ||||||||| Sbjct 49628 TGGTACGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAAAGAC 49687 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 ||||| || | ||||| || || |||||| |||| || || ||||| || || Sbjct 49688 GCCTGCAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTCGCAGCTCCAATCTTTGC 49747 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 ||||| || | || | |||| || || |||||| ||||| || || || | Sbjct 49748 ACAGAGATTATCGAGTACACAGCACCCGACGAAGTGGCTGTCTGTAATCTTGCGTCTCTT 49807 Query 112458 GCTCTCCC 112465 || ||||| Sbjct 49808 GCCCTCCC 49815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620721217165600