Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1467 122 1e-22 seq1172 102 1e-16 >seq1467 Length=78481 Score = 122 bits (134), Expect = 1e-22 Identities = 619/973 (64%), Gaps = 28/973 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTT 109563 ||||| || ||||| ||||| |||||| ||||| ||||| | | ||| ||| | Sbjct 50583 GACTGGGATTGATCAATGAAAGCACCACGGTCAGCAGCCATTTGTACAATGGTACG---T 50527 Query 109564 TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATG 109623 || |||||||||||| |||||||| | | || ||||| || ||||||| || Sbjct 50526 TGAGAAATTTCCCAGACTGTCTTGTAGAGAGCTTTAATATCGTCAGGAATGTTTGGAATC 50467 Query 109624 TTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCG 109683 || ||||||||||| | | ||| | | ||||| | | ||||| ||||| Sbjct 50466 CGCTGGATAGAGCCACCGTCGGCTATAATGCGGTTTTTCATGTTATCGGACCAAAGACCC 50407 Query 109684 ACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 | | || || | | || | |||||| || |||||||| || || Sbjct 50406 ATGTCAACAAGGTCTTTTAGGAGCCACGGGTTGACGACCTGGAATTCACCTGCTAGCACA 50347 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 || || ||| || |||| ||||| || ||||| || ||||||||||| || || || Sbjct 50346 CGGCGTGAGTAAATATTAGAGGTGTAAGGCTCGAAGCATTCATTGTTGCCCAGAATCTGG 50287 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCT 109861 | |||||||||||||||||||| || | || || ||| |||| ||| | | | || Sbjct 50286 GAGGTGGAAGCTGTGGGCATGGGCGCAACAAGGAGGGAGTTGCGGACACCGTATTGGGCT 50227 Query 109862 TTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCC 109921 | || | | | || ||||| || || | | | ||| || | || Sbjct 50226 ATGGATGC-CTTG-AGTGAATCCCAGTCCCAAAGGTCTGTGGG---AGTGACA---TTCC 50175 Query 109922 ACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACC 109981 |||| || ||| || | ||||| || | |||| || || | | | | | || | | Sbjct 50174 ACATGTCGTATTGGAGGATACCCTGAGAAACAGGCGAGCCTTCGTAGGTAGCATAAGGAC 50115 Query 109982 CCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAA 110041 | | | || | |||| | || | || || || || || || ||||| |||| Sbjct 50114 CAAGTTCTTTAGCAAGCTCGCAGGATGAGGTGAGCGCAGCGTGGTAGATGGTCTCGAAAA 50055 Query 110042 TATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACA 110101 | ||| || | | |||| | | ||||| ||||||| | | || || Sbjct 50054 TTTGAATGTTAAGCTTCTTGGCCTCTGGAGAATCGAAAGGAAGACGAAGAGCAAGGAAGG 49995 Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 |||| || |||||||| || || ||||||||||| ||||| | ||| ||| |||| Sbjct 49994 CATCAGCAAGACCCTGGACGCCAAGACCAATGGGCCGATGACGGAAGTTGCTGCGGCGAG 49935 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | ||| || |||||| |||| ||||||| ||||||||| ||||| | || Sbjct 49934 CCTCTTCGACAGGGTAATGGTTGACTTCGATGATTTTATTGAGATTGCGAGTCAC-GACT 49876 Query 110222 TCGTG-ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC-TTATTG---ACATA 110276 | | | ||| || | ||| | |||| | ||| | | || | | || | Sbjct 49875 TGGACTACTTCGTGCAACTTGGCAAAATCATA----TTCACCACGATTGTAGTCCACGAA 49820 Query 110277 TTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC 110336 ||||| |||| |||||||||||| || |||| ||||| | ||||| || Sbjct 49819 GGACGGGAGGGCAAGAGACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTC 49760 Query 110337 CAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGATT 110395 | ||| || || || | ||||| || ||| |||| |||||||| || | || Sbjct 49759 GATAATCTCTGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTT 49700 Query 110396 TGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGA 110455 || ||||| || || || ||||||||||||||| | || || || || || | || || Sbjct 49699 CCGA-TTGCAGGCGTCTTTGTAGAGCATGTATGGGTTGCCGGTCTCGGTTTGGGCCTCGA 49641 Query 110456 GAATGGCCTTCCA 110468 ||||||| | ||| Sbjct 49640 GAATGGCGTACCA 49628 >seq1172 Length=25530 Score = 102 bits (112), Expect = 1e-16 Identities = 222/326 (68%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || |||| ||| ||||| ||||||||||| | || ||||| ||| | || | | Sbjct 15296 TTGCCGATAGCATCAATTTCATCGATGAAGATAATGCACGGGGTGTTCTTCCTCGCATTT 15237 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || | || | | || || ||||| || |||||||||||||| | | Sbjct 15236 GCGAACAGGTCTCTCACTCTCGACGGGCCGACACCGACAAACATCTCAACGAACTCAGAC 15177 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || | || ||||| ||| || || ||| || || || | ||| ||||| | | Sbjct 15176 CCGCTG-ACGCTGAA-GAACGGTACGCCAGATTCGCCTGCAGTAGCTTTTGCGAGTAATG 15119 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTT 11910 ||||||| |||||||| | |||| ||||| || |||||||| ||||| ||||| | || Sbjct 15118 TCTTACCGGTACCAGGAGGTCCAGAGAGAATAGCTCCACGGGGTATCTTAGCACCAAGTT 15059 Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCG 11970 | | ||| | |||| || |||||| || | ||| || ||||| ||| || Sbjct 15058 TCTGA-TAGACTCCCGGCTCTTTCAGGAAGCTAACGAATTCCATAATTTCCTGCTTTGCC 15000 Query 11971 GAGTCGATACCCTCAACATCGGTGAA 11996 ||| ||||| ||||||| | ||| Sbjct 14999 TCGTCCATACCAGCAACATCAGAGAA 14974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588955901194000