Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1467 131 2e-25 seq1023 98.7 1e-15 >seq1467 Length=78481 Score = 131 bits (144), Expect = 2e-25 Identities = 420/643 (65%), Gaps = 9/643 (1%) Strand=Plus/Minus Query 106738 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 106797 ||| || || | || || |||||||| | ||| |||| | ||| || |||||||| Sbjct 49482 ACCAGGAGCTTCGTTAGGGCAGAAAAGTGTCCAGCTACCATTTTGCTCGACTCGCTTCAT 49423 Query 106798 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC 106857 |||||| ||||||||||||| || | ||||| |||| ||| |||| || | || Sbjct 49422 GAAAAGATCTGGAATCCACAAGGCGTAGAAGAGGTCTCGGGCACGAACCTCCTCCTTGCC 49363 Query 106858 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 106917 || || ||| | ||||| || | || ||| |||||||||||||| || |||| Sbjct 49362 GTGATTCTTTCGGAGATCAAGAAAACTGAAGACATCAGCGTGCCATGGCTCGAGGTAGAT 49303 Query 106918 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | | || || | |||| | || | |||||||| || ||| ||| | Sbjct 49302 GGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGTA 49243 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 107034 || || | |||||| || | || | ||| ||| || || || | |||| || Sbjct 49242 GACTCGTAACATTGGTATTAGGCCGTTCGATGTACCGTTCGTTCCACCAATATATGAACC 49183 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 | | || | | |||| || | |||||||| ||||| || ||||| || Sbjct 49182 AGTAGCACGAATGCGGTGGACGTTTAGACCAATACCGCCAGCGGTTTTGGAGATCATGGC 49123 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 |||| | || || |||| || || | ||| ||| ||||| || | || ||||| Sbjct 49122 ACACGTTTTCAGTGTGTCATAAATGCCTTCGATGCTGTCTTCCTTCATGTCAATGAGGAA 49063 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214 ||| ||||||||| | || || || |||||||| || || || | || ||| | Sbjct 49062 GCATGAGGACATCTGTGCAGAGGGCGTGCCGGCATTGAATAGTGTGGGCGAAGCATGAGT 49003 Query 107215 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273 || || | | |||||| | ||||| ||||| | | ||||| ||||| || | Sbjct 49002 -AAAGTATTTGTTGGACATATAATCGTACGTCTCTAGTGCTTTCTCAATATCTTCGCCAT 48944 Query 107274 GGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAG-GATGCCATCG 107332 | ||||| | ||| |||||||| | ||||| || ||| | || || |||| ||| Sbjct 48943 GAATGCCAACGGCAACACGCATGAGCATGTGCTGTGGTCGCT-CAGCAGTCTTGCCGTCG 48885 Query 107333 AGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAG 107374 | ||| | ||||| | || | ||||| || |||| |||||| Sbjct 48884 ATTCGTAGGAGATATGATCGT-TCAAGTGTCTTGAATCCAAAG 48843 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || || | ||| || |||||| || || |||||||||| | | Sbjct 49815 GGGAGGGCAAGAGACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATA 49756 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || ||||| || | ||||| || ||| || |||| |||||| ||||| ||||| Sbjct 49755 ATCTCTGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGA 49696 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| || || |||||||||||||| || | || ||||| || || | || |||||| Sbjct 49695 TTGCAGGCGTCTTTGTAGAGCATGTATGGGTTGCCGGTCTCGGTTTGGGCCTCGAGAATG 49636 Query 106637 GCCTTCCA 106644 || | ||| Sbjct 49635 GCGTACCA 49628 >seq1023 Length=12933 Score = 98.7 bits (108), Expect = 1e-15 Identities = 283/425 (67%), Gaps = 18/425 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||| ||||| || || ||||| ||||| Sbjct 7548 TAGTCACCAACGCGCTTCTCGAAGAAGTTTGTCTTGCCTGACAGAGAGATGTTCTCCATG 7489 Query 117046 AAGTCAAATGGATTCTTCGCGT-----TCCAAATGGGTGGCACCCCAACTTGTTTGAGG- 117099 |||||||| || || | |||| | | | | || ||||| || || | Sbjct 7488 AAGTCAAACGGGTTTGTTGCGTGATAGTACTTCTTGTTG----CCCAA--TGCCAGAAGC 7435 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 | ||| || | ||| |||| ||||||| | ||||| | |||||||| || | | | Sbjct 7434 AAACGGTCAGCAACAAACTCGATGTACTGGCACATCAGTTTGGAGTTCATGCCAAGTA-A 7376 Query 117160 TTACA-TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218 | | ||| | |||||| | |||| | | |||||| |||||||||| | | ||| Sbjct 7375 TGCGACTGGCAATGCGTCTGTAAGGAACTCCTGCTCAATTGTAACCGCCTCTGTGATGAT 7316 Query 117219 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAA 117277 ||| | | | | | | | |||| | | | | || |||||| ||| | Sbjct 7315 GGCTTCCACCGCCTTAGGACTTGGTCGACT-CTTGATGTGAGAGAAGAGAAGGCAGGCGA 7257 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| | ||||||||| || || || ||||| || |||||| || || |||| Sbjct 7256 AGTCGGTGTGCATACCCTCATCGCGCGAGATGAGTTCGTTCGAGAAGGTTAAACCAGGCA 7197 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396 |||| || |||||||| | ||| |||| | ||| ||| || ||| ||||||||||||| Sbjct 7196 TGAGTCCGCGCTTCTTAAGCCAGAAAATGGACGC-GAAAGATCCGCTGAAGAAGATACCC 7138 Query 117397 TCCAC 117401 || || Sbjct 7137 TCGAC 7133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589960666905200