Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2239 105 8e-18 >seq2239 Length=36388 Score = 105 bits (116), Expect = 8e-18 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| ||||||| | ||| |||| || || || || || || || |||||||| | Sbjct 6288 CAACGGTTTGGAGTGCCTTTGGGTTATGGTGGGCCACACGCGGCTTTCTTTGCGTGTAGT 6229 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || ||||| ||| | ||||| ||||| | || |||| ||| ||| || ||| Sbjct 6228 GAAAAGTACAAGCGTAAGATCCCTGGACGCCTTATAGGGTTGTCGAAAGACAGGCTAGGC 6169 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || || ||| | ||| | ||||| |||||||| ||||| | || || || ||| Sbjct 6168 GATCCTGCGGCGAGACTTGCATTGCAGACGAGAGAGCAACATATTCGCAGGGAAAAGGCA 6109 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCA 158682 || ||||| || ||||| || ||||| ||||||||||| ||| | ||| ||||| | Sbjct 6108 ACAAGTAATATTTGCACTGCCCAAGCCCTGCTGGCTAACATGAGCGCGTTTTATGCCATA 6049 Query 158683 TATCATGG 158690 ||||| || Sbjct 6048 TATCACGG 6041 Score = 100 bits (110), Expect = 3e-16 Identities = 429/670 (64%), Gaps = 11/670 (2%) Strand=Plus/Minus Query 159117 TATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAACTGATGCCTGT 159176 |||| | || |||||| |||||||||||| |||||||| || | || || | || || Sbjct 5533 TATGATACCTCTTGGTTCCTGTACTATGAAATTAAACGCAACAACGGAGATGGTCCCGGT 5474 Query 159177 GTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTATGATACAGACCATGGGTTA 159236 ||||||| ||||| | | | |||||| | ||| || || || |||||| Sbjct 5473 GTCATGGCCGGAGTTCTCATCCATTCATCCATTCGCGCCTTTGGACCAAGCCGAGGGTTA 5414 Query 159237 TCAAAAAATTATAGATGACTTACAGAAATGGTTATGT--GATATCACAGGGTTTGATTCT 159294 | | | || | || || ||| | || | || || |||||||| ||| |||| Sbjct 5413 TGCTATCCTAATTGCGGAGTTGCAGCA--GGATCTGGCAGAAATCACAGGCTTTCATTCA 5356 Query 159295 ATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAA 159354 |||| |||| || || | || | |||||||||| || || || | || | Sbjct 5355 GTATCGCTACAGCCAAATTCTGGTGCGCAGGGTGAGTTCGCTGGCTTGCGGGTGATTCGT 5296 Query 159355 GCATACCATCAAGGATCAGG-AGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGC 159413 |||||| ||| | ||| || | ||| | || | || | || || | || || Sbjct 5295 AAATACCAGGAAG-ACCAGCCAGGAAAGAAACGCGATATCTGCCTCATCCCGGTATCCGC 5237 Query 159414 ACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTG 159473 || || || || ||||| || | ||||||||||||| || || ||||||| Sbjct 5236 GCACGGCACCAACCCTGCTAGTGCGGCGATGGCAGGGATGCGGGTCGTCCCGATCAAGTG 5177 Query 159474 TGATGATGAT---GGCAACATAGACATCAAAGATCTAGAGAAGAAA-GCAATCATGAATA 159529 || | | || || | ||| | ||||||| || ||| || | | | | | Sbjct 5176 CGACAACGTAACAGGAAATCTTGACCTGGAAGATCTCAAGGCCAAATGCGAAAA-GCACA 5118 Query 159530 CATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAA 159589 |||||| | |||||| | |||||||| ||| ||| || ||||| ||| Sbjct 5117 GCGAGGAACTGGGAGCAATTATGGTCACATATCCGAGCACATTTGGCGTCTTTGAGCCAA 5058 Query 159590 ACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTG 159649 | |||| | ||||| || |||| ||| || | || || ||||| ||| | ||||| | Sbjct 5057 AGATCAAGGAAGTATGTGAGCTTGTCCATCAGCACGGCGGCCAGGTTTATATGGATGGAG 4998 Query 159650 CAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTC 159709 | || | ||||| ||| | || || || | || || || ||||| || | Sbjct 4997 CCAACATGAATGCCCAGATTGGGCTTTGCTCGCCTGGGGAGATAGGGGCCGATGTCTGCC 4938 Query 159710 ATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTC 159769 |||| || | ||||| || ||||| ||||| || || || || || ||||| || || | Sbjct 4937 ATCTCAATCTTCATAAAACCTTCTGCATTCCTCACGGTGGAGGCGGGCCTGGTGTTGGAC 4878 Query 159770 CTATTGGTGT 159779 |||||||||| Sbjct 4877 CTATTGGTGT 4868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588031132752800