Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1886 152 1e-31 seq1467 86.0 1e-11 >seq1886 Length=76891 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||||||||| ||||| || ||||||| || || | ||||| || Sbjct 23846 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCCTCA 23787 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||||||||| || || || ||||| || Sbjct 23786 AGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGG 23727 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || || ||||| || || ||||| |||| |||||| Sbjct 23726 ATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTCTTT 23667 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 23666 CCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || || |||||||| ||||| |||| || |||| ||||| || ||||| Sbjct 24069 GTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTG 24010 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || ||||| || || ||||||||||| ||||| || || || Sbjct 24009 CTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTT 23950 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| || ||||| ||| ||||| || || | |||||||| || Sbjct 23949 AGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGT 23890 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 23889 GAGCGTCTTAACGAAAATCTGCAT 23866 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| ||||| ||||| || ||||| |||| ||| |||| || || || | |||| Sbjct 24296 TGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGC 24237 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || || || ||||| || ||||||||||| || || || ||||| || Sbjct 24236 TTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTA 24177 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| ||||| || || ||| ||| ||||| | |||| || || || || Sbjct 24176 GACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTT 24117 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 24116 AGAGTCTTGACGAATATTTGCAT 24094 Score = 131 bits (144), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||||||||| || || |||||||| || | ||||| || || |||||| Sbjct 23618 ACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCTTCG 23559 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||| || || |||||||| ||||| || Sbjct 23558 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGG 23499 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || || || || ||||| |||||||| | ||||| Sbjct 23498 ATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGTCTTG 23439 Query 195112 CCTGTCA 195118 || |||| Sbjct 23438 CCGGTCA 23432 >seq1467 Length=78481 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 160577 GCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGAC 160636 ||| |||| | ||||||||| | |||| | | ||||||||||||||| |||| | | Sbjct 49381 GCCCGAGACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAGCGAGTCGAGCAA 49440 Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696 ||||| |||| |||||||| || || ||||| ||||| | | ||||||||||| Sbjct 49441 AATGGTAGCTGGACACTTTTCTGCCCTAACGAAGCTCCTGGTTTGGCAGATGTTTATGGC 49500 Query 160697 TCCGAGTTCGAG 160708 |||||| ||| Sbjct 49501 GACGAGTTTGAG 49512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109442792413910