Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq427 105 5e-17 seq1886 86.0 5e-11 >seq427 Length=55867 Score = 105 bits (116), Expect = 5e-17 Identities = 125/168 (74%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 550381 TGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||| ||||| || | | |||| || | || ||||||||||| || || ||||| || | Sbjct 34017 TGGGCAAGAGCGTCAAGAATGCCGTTGTCACCGTACCAGCATACTTCAACGACTCCCAGC 33958 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||| || || || ||||| || | ||| | || || || || |||||| | | |||| Sbjct 33957 GTCAGGCCACCAAGGATGCCGGTCAAATTTCCGGTCTGAACGTGCTTCGTGTCGTGAATG 33898 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATC 550547 | ||||||||||| || ||||||||||| || ||||| ||||||| Sbjct 33897 AGCCTACTGCTGCGGCGCTTGCATATGGTCTCGATAAGTCGAATGATC 33850 >seq1886 Length=76891 Score = 86.0 bits (94), Expect = 5e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || | ||||| ||| ||| || ||| ||||| || | || |||| Sbjct 24084 GAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCG 24025 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| ||||| || || || ||||| || || | || ||||| || ||||| ||||| Sbjct 24024 GCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTC 23965 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || || || || || || ||||| ||||| | || | | |||||||| Sbjct 23964 CTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGAC-GATTCGACTTCGAGAG 23906 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || || || || || ||||||||||| |||||| Sbjct 23905 TGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCATA 23865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029151625287700