Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1886 125 5e-24 >seq1886 Length=76891 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | ||| || | ||||||||| || || ||| ||||| || ||||| || || Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| |||| ||||||||||| ||||| || ||||| ||||||||||||| ||| Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||| || |||||| || || | | || ||||| | || || Sbjct 24200 ATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACT 24141 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || || | ||| || || || || ||||| Sbjct 24140 TCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || || |||||||| ||||| || || || |||| Sbjct 24083 AGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGG 24024 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || ||||||||||||| ||||| ||| ||| Sbjct 24023 CCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCC 23964 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || |||| || || || | || Sbjct 23963 TTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTG 23904 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || || ||||||||||| Sbjct 23903 ATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380924925491790