Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1023 145 1e-29 seq1467 141 2e-28 >seq1023 Length=12933 Score = 145 bits (160), Expect = 1e-29 Identities = 343/510 (67%), Gaps = 21/510 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||||||||| || || ||||||||||| Sbjct 7552 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTTGTCTTGCCTGACAGAGAGATGTTCTC 7493 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| || ||||| | || || ||| | | ||| ||||| | |||| Sbjct 7492 CATGAAGTCAAACGGGTTTGTTGCGTGATAGTACTTCTTGTT--GCCCAA---TGCCAGA 7438 Query 47957 AGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || | || || || |||||||||| | |||| || || ||||||||| | Sbjct 7437 AGCAAACGGTCAGCAACAAACTCGATGTACTGGCACATCAGTTTGGAGTTCATGCCAAGT 7378 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | | || ||||| || | ||| || ||||||| ||| || || || || | Sbjct 7377 AATGCGACTGGCAATGCGTCTGTAAGGAACTCCTGCTCAATTGTAACCGCCTCTGTGATG 7318 Query 48074 ATCTGCTT--AACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCT-TGGCATA-GAGCAT 48129 || |||| | ||| || ||| ||| | | || | || | | ||| | Sbjct 7317 ATG-GCTTCCACCGC------CTTAGGACTTGGTCGACTCTTGATGTGAGAGAAGAGAAG 7265 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||| ||||| |||||| || || || || |||||| |||| |||||| | Sbjct 7264 GCAGGCGAAGTCGGTGTGCATACCCTCATCGCGCGAGATGAGTTCGTTCGAGAAGGTTAA 7205 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || || ||||||||||| | ||||||||| || |||||| Sbjct 7204 ACCAGGCATGAGTCCGCGCTTCTTAAGCCAGAAAATGGACGCGAAAGATCCGCTGAAGAA 7145 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||||||| | | | |||| | || |||||| || || Sbjct 7144 GATACCCTCGACCGCGGCGAACGCGACTAAGCGAGATGCGAAGGTAGAGTTCTTATCGGA 7085 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||||| ||| ||||| || |||||||| Sbjct 7084 TATCCATCGAAGAGCCCAATCGGCCTTCTT 7055 Score = 102 bits (112), Expect = 2e-16 Identities = 174/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| || || ||| | || || | Sbjct 6912 TCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAAAAGCATCGCGCTTCTGGTA 6853 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 | || ||||| | ||||| ||| | || ||||||||||| || |||||||| || | Sbjct 6852 CTTGTACTTCGCCGCTGAATCGCTCAACCAAGTTCTCATTGACGATACCATCTGATGCTG 6793 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCC 48605 | ||||| || ||||| || || || |||||||| || | ||||| || |||| Sbjct 6792 CGAAGAATGCGAGGACGTGGGAAATAAAGAAGCGCTCGTCGTTGTTGAGACGCTTGTTCC 6733 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | |||||| || || | |||||| | ||||||||||| || ||| | Sbjct 6732 AGTCGTGAAGATCTTTGGATAGATCAATTTCTTCGGCGGTCCAGAAGGATGCTTCTGCCT 6673 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 6672 TCTTGTACAT 6663 >seq1467 Length=78481 Score = 141 bits (156), Expect = 2e-28 Identities = 485/744 (65%), Gaps = 29/744 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||||| ||||| | | ||||| || || ||||| Sbjct 50379 GGGTTGACGACCTGGAATTCACCTGCTAGCACACGGCGTGAGTAAATATTAGAGGTGTAA 50320 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || || ||||| ||||||||||| | ||| |||||||||||||| || Sbjct 50319 GGCTCGAAGCATTCATTGTTGCCCAGAATCTGGGAGGTGGAAGCTGTGGGCATGGGCGCA 50260 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGAT-GAGGCGCCGAAGCTCTGCCCAGTC 213085 || ||||| ||| | || |||| | | | || || || | || ||||||| Sbjct 50259 ACAAGGAGGGAGTTGCGGACACCGTATTGGGCTATGGATGC-CTTGAGTGAATCCCAGTC 50201 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 || | ||||| | | || ||||||||||| | || | ||| || | Sbjct 50200 CC---------AAAGGTCTGTGGGAGTGACATTCCACATGTCGTATTGGAGGATACCCTG 50150 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 || || ||| | ||| | | || || ||| | || || || ||||||||||| Sbjct 50149 AGAAACAGGCGAGCCTTCGTAGGTAGCATAAGGACCAAGTTCTTTAGCAAGCTCGCAGGA 50090 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 | || ||||||| ||||||||| || || || | |||| |||||||||||||| Sbjct 50089 TGAGGTGAGCGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGCTTCTTGGCCTC 50030 Query 213266 TGGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 ||| || ||| || | | | | | |||| ||||||| || |||||||| || | Sbjct 50029 TGGAGAATCGAAAGG-AAGACGAAGAGCAAGGAAGGCATCAGCAAGACCCTGGACGCCAA 49971 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTT-AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||| | || | | ||| | |||| ||| || | |||||| |||| Sbjct 49970 GACCAATGGGCCGATGACGGAAGTTGCTGCGGCGAGC-CTCTTCGACAGGGTAATGGTTG 49912 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCA----GG-- 213437 |||||||| || ||||| ||||| || | |||| | || | | || || Sbjct 49911 ACTTCGATGATTTTATTGAGATTGCGAGTCACGACTTGGACTACTTCGTGCAACTTGGCA 49852 Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || | ||| | |||| || | ||| || || ||||| | || Sbjct 49851 AAATCAT-ATTCACCACG-----ATTGTAGTCCACGAAGGACGGGAGGGCAAGAGACGCA 49798 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 || || || || ||||| || | | |||||||||| || ||||| ||||| || ||| Sbjct 49797 AGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATAATCTCTGTGCAAAGATTG 49738 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCTTGTA 213616 || || || || ||||| |||| ||| ||| || || | ||| | || ||||| Sbjct 49737 GAGCTGCGAATAGTTCCCAGATTCTTCTGG-TTGCTCTTCCGATTGCAGGCGTCTTTGTA 49679 Query 213617 GAGCATGTAGGGGGACCCGGTCTC 213640 ||||||||| ||| |||||||| Sbjct 49678 GAGCATGTATGGGTTGCCGGTCTC 49655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931501011443200