Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1467 104 3e-17 seq1023 98.7 1e-15 >seq1467 Length=78481 Score = 104 bits (114), Expect = 3e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || |||||| | | || || ||||| || | ||||| ||||| ||||| | Sbjct 49626 TTTGGTACGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAAAG 49685 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 | || || || |||||| ||||| |||||| ||||||| || ||||| ||||||| Sbjct 49686 ACGCCTGCAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTCGCAGCTCCAATCTTT 49745 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 |||| || ||| | |||||||||| || || |||||| || ||| | || || Sbjct 49746 GCACAGAGATTATCGAGTACACAGCACCCGACGAAGTGGCTGTCTGTAATCTTGCGTCTC 49805 Query 76056 TCGCCCTTCC 76065 | ||||| || Sbjct 49806 TTGCCCTCCC 49815 >seq1023 Length=12933 Score = 98.7 bits (108), Expect = 1e-15 Identities = 283/425 (67%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGG 65159 || ||||||||||||||| ||| || ||| ||| | |||| ||| | |||||||| || Sbjct 7133 GTCGAGGGTATCTTCTTCAGCGGATCTTTC-GCGTCCATTTTCTGGCTTAAGAAGCGCGG 7191 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCA 65219 |||||||| || || |||||| || ||||| || || || ||||||||| | ||| Sbjct 7192 ACTCATGCCTGGTTTAACCTTCTCGAACGAACTCATCTCGCGCGATGAGGGTATGCACAC 7251 Query 65220 GGAGTTTGCCGTGGAGCTCTTC-AAGACTTTGCGTAATAGACCCACTACCGAAACTATCC 65278 || || ||| |||||| || | | | | |||| | | | | | | Sbjct 7252 CGACTTCGCCTGCCTTCTCTTCTCTCACATCAAG-AGTCGACCAAGTCCTAAGGCGGTGG 7310 Query 65279 ACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCA- 65337 | |||||| | | |||||||||| |||||| | | |||| | |||||| | ||| Sbjct 7311 AAGCCATCATCACAGAGGCGGTTACAATTGAGCAGGAGTTCCTTACAGACGCATTGCCAG 7370 Query 65338 TGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGAT 65397 | || | | || |||||||| | ||||| | ||||||| |||| ||| | || Sbjct 7371 TCGCAT-TACTTGGCATGAACTCCAAACTGATGTGCCAGTACATCGAGTTTGTTGCTGAC 7429 Query 65398 CGTCT-CCTCAAACAAGTTGGGGTGCCACCCATTTGGA-----ACGCGAAGAATCCATTT 65451 ||| | | || || ||||| || | | | | |||| | || || ||| Sbjct 7430 CGTTTGCTTCTGGCA--TTGGG----CAACAAGAAGTACTATCACGCAACAAACCCGTTT 7483 Query 65452 GACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGG 65511 ||||| ||||| ||||| || || ||||| |||||||| |||||||| ||||| Sbjct 7484 GACTTCATGGAGAACATCTCTCTGTCAGGCAAGACAAACTTCTTCGAGAAGCGCGTTGGT 7543 Query 65512 GACTA 65516 ||||| Sbjct 7544 GACTA 7548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596549242062400