Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1886 105 1e-17 seq1281 91.5 3e-13 >seq1886 Length=76891 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| | || ||||| | ||| | ||| || ||| || || || || | |||||| Sbjct 24311 AGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGG 24252 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 | || ||||| || || || || || || | | ||||||||| || || || || || Sbjct 24251 CCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCC 24192 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 ||||| || || ||| || || || |||| |||||| ||||| ||||| | |||| Sbjct 24191 TTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTA 24132 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||| || |||| || || | ||||| ||||| Sbjct 24131 ATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 >seq1281 Length=62249 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 192378 TTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTC 192437 |||| | || | ||||||||||||||||| |||||||| ||||| || |||||||| || Sbjct 46611 TTCACCTTCAAGCTGTTTACCAGCAAAGATCAATCTCTGCTGATCCGGGGGTATTCCCTC 46552 Query 192438 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGT 192497 | |||| ||||| ||||| | | | |||||||| || || | ||||| || | Sbjct 46551 TCGGCCTTGAATTTTCTTTTTAATGTCGTTGATAGAATCCGATGACTTCACTTCCAGGGC 46492 Query 192498 AATGGTTTTACCAGT 192512 || |||||||| || Sbjct 46491 GATAGTTTTACCCGT 46477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984445564735500