Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1886 102 1e-16 seq1747 84.2 4e-11 >seq1886 Length=76891 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| | ||| | ||| || || || || || || | | ||| |||| ||| Sbjct 24302 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 24243 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 || || || || || ||||| | | |||||| || || || || || || ||||| || Sbjct 24242 AACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGA 24183 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || ||| || || || ||||||||||| ||||| ||||| | |||||||||||| Sbjct 24182 ATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTG 24123 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| || || | |||||| ||||| Sbjct 24122 CCGGTTAGAGTCTTGACGAATATTTGCAT 24094 >seq1747 Length=57527 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || ||||| || ||||| || || || | ||||||||| || || || || || ||| Sbjct 34946 TCCTCTAATTGCTTTCCAGCGAAGATCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTA 35005 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || |||||||| |||||||| ||||||||| || || || ||| Sbjct 35006 TCCTGGATCTTCGACTTTACATTGTCGATAGTATCACTCGATTCTACCTCGAGGGTGATG 35065 Query 172035 GTTTTACCAGT 172045 |||||||| || Sbjct 35066 GTTTTACCCGT 35076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905105112234000