Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1467 118 3e-21 seq108 111 5e-19 seq389 93.3 1e-13 >seq1467 Length=78481 Score = 118 bits (130), Expect = 3e-21 Identities = 357/541 (66%), Gaps = 14/541 (3%) Strand=Plus/Minus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCA-ATATCAGGATGGTGTG 156027 |||||| | |||||||||||| || || || ||||| | | | ||||| || || Sbjct 49374 CTCCTCCTTGCCGTGATTCTTTCGGAGATC-AAGAAAACTGAAGACATCAGCGTGCCATG 49316 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAG 156084 |||| || || || ||||| ||| || | || |||||||| || ||||| |||| Sbjct 49315 GCTCGAGGTAGATGGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGTCAACATAGCGAG 49256 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 |||| || ||| |||| | || ||| || || | || || || || || || ||||| | Sbjct 49255 CAGTGTTGTTGTAGACTCGTAACATTGGTATTAGGCCGTTCGATGTACCGTTCGTTCCAC 49196 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 ||||| ||||||| | |||| || | | ||| |||||||| || | || Sbjct 49195 CAATATATGAACCAGTAGCACGAATGCGGTGGACGTTTAGACCAATACCGCCAGCGGTTT 49136 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTAT-TGA-AAATACCTTCAATAGAATCATCTTC 156262 | || | | | ||| | ||| |||| | | | |||| ||||| || || || | Sbjct 49135 TGGAGA--TCATGGCACACGTTTTCAGTGTGTCATAAATGCCTTCGATGCTGTCTTCCTT 49078 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322 ||| | || |||| || | || | || || || || ||||||||||| Sbjct 49077 CATGTCAATGAGGAAGCATGAGGACATCTGTGCAGAGGGCGTGCCGGCATTGAATAGTGT 49018 Query 156323 AGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAAT--CTTC 156380 || | |||||| |||| || || || |||||||||||||| ||||| || | ||| Sbjct 49017 GGGCGAAGCATGAGTAAAGTATTTGTTGGACATATAATCGTACGTCTC--TAGTGCTTTC 48960 Query 156381 TCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCT 156440 |||| || || ||||| | | | || | ||| ||| ||||| || ||||| Sbjct 48959 TCAATATCTTCGCCATGAATGCCAACGGCAACACGCATGAGCATGTGCTGTGGTCGCTCA 48900 Query 156441 ACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAA 156500 || || || || ||||| || || |||| ||||| || || || || || ||| || Sbjct 48899 GCAGTCTTGCCGTCGATTCGTAGGAGATATGATCGTTCAAGTGTCTTGAATCC-AAAGAA 48841 Query 156501 T 156501 | Sbjct 48840 T 48840 >seq108 Length=26577 Score = 111 bits (122), Expect = 5e-19 Identities = 210/307 (68%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 302562 AATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGT 302621 || ||||| ||||| | ||| | ||| | ||||||||| || |||||| | || Sbjct 17648 AACCATAACATCTTCAAGGGCCTTAACTAATCTACGCTGAATGTAGCCAGTTTCGGCAGT 17707 Query 302622 TTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTC 302681 || ||||| || ||||| ||||| |||||||| |||| || |||||||| | ||| Sbjct 17708 CTTGACAGCAGTGTCAATGAGACCTTCACGACCAGCCATGGCGTGGAAGAAAAACTCAGT 17767 Query 302682 CGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTC 302741 || || || | | |||| |||| || ||||| | ||||| || || | || Sbjct 17768 GGGAGTGAGGCCTCGTAGGTAGGAATTCTCCACAAAACCTCTGGCCTCAGGGGAGTAATC 17827 Query 302742 GAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATC 302801 | |||||||||||||| |||| | || | ||||| | || || ||||| || || Sbjct 17828 GTCTTTGGTAAAGTGTGGTAGGGATCGGTATTTGAAGCCGAAAGGAATGCGCTTGCCTTC 17887 Query 302802 AACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTG 302859 || ||||| |||| || | |||| ||||||||||| ||| ||| || ||| Sbjct 17888 GACTGATTGCTGGCCCACAAGCGCAGTCATTTGCGAAATATT--AATAGCTGAACCTTTG 17945 Query 302860 GAGCCAG 302866 || |||| Sbjct 17946 GATCCAG 17952 >seq389 Length=44268 Score = 93.3 bits (102), Expect = 1e-13 Identities = 334/512 (65%), Gaps = 18/512 (4%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| ||||| ||||| |||||||| ||||| || |||||||| ||||||||||| | Sbjct 34881 GCACCATGTGAGATCATGCAATCACGTTCCATCTCTCCGAAACGCAGACCACCATCTCTT 34940 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | ||| ||| ||||||| || || ||| | || || || | | ||| || Sbjct 34941 GCACGACCTTCGACAGGCTGTCGTGTAAGAATCTGCAAGGGGCCTCTAGCGCGTGCGTGG 35000 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TGC 251662 ||| || | ||||| || | || |||||| ||| || || | ||||| ||| Sbjct 35001 ATCTTGTCGTCAACCATGTGGCGCAAGCGTTGGTAGTATGTCGGGCCTAAGAAGACCTGC 35060 Query 251663 TCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCAT 251722 ||| ||| | | ||||| | |||| ||||| |||||| || | || || Sbjct 35061 GCGA--CCATCTTTTTGCCAGTGTGGCCGTTGTACATGACTTCGAAACCGCGACTTTGAT 35118 Query 251723 AACCAAGTTTCTGTAGC--TCTGAAG-CAATATCACCAATCTTGA-ATTTGCTAAAACTG 251778 | ||| | | | ||| | || || | | | ||| ||| || || | ||| Sbjct 35119 AGCCATGCTCGCGAAGCAATTTGGAGACGCTTT---CAACGGTGACATCTG-TGAAAGGT 35174 Query 251779 GTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGT 251838 ||| |||| || | | ||| || || ||| ||| || ||| | | Sbjct 35175 GTGGCGTCGCCTTCACAACCACGAAGAGAGCCGACCTTGGATAACAGACACTCGATTAAA 35234 Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| ||||||||||| ||||| || || ||||||||||||| ||||| | || Sbjct 35235 TGGGCTATAGTCATACGCGATGGAATGGCGTGCGGATTGATGATGAGATCGGGCGTAAGG 35294 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTT 251955 || ||| |||||| ||||| || ||||| | || || |||||||| || || Sbjct 35295 CCTTCACGAGTGAAAGGCATGTC---TTCCTGCCGGTATGTGACACCAATAGTGCCTTTC 35351 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||| ||| || || || ||||| Sbjct 35352 TGACCGTGACGCGAAGCAAATTTGTCTCCAAT 35383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471766118580010