Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq121 118 1e-20 seq1023 95.1 1e-13 seq1287 91.5 2e-12 >seq121 Length=74344 Score = 118 bits (130), Expect = 1e-20 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| ||||||||||| | ||||||||| | || |||||| |||| || || Sbjct 7030 GCTGCCAACTATCTCGACATCAAAGCCCTGCTCGATGTCGGCTGCAAGACTGTCGCTAAT 7089 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||| ||||||||||| || || |||||||| ||||||||||||||| Sbjct 7090 ATGATTAAGGGCAAGTCCCCAGACGAGATCCGTAAGACCTTTAACATC 7137 >seq1023 Length=12933 Score = 95.1 bits (104), Expect = 1e-13 Identities = 178/257 (69%), Gaps = 11/257 (4%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || |||||||||||| |||||| | | | |||| |||| Sbjct 6909 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAAAAGCATCGCGCTTCTGGTACTT 6850 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||| || | ||| |||||| ||||| || || || |||| Sbjct 6849 GTACTTCGCCGCTGAATCGCTCAACCAAGTTCTCATTGACGATACCATCTGATGCTGCGA 6790 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC-----CCA 869805 | || || |||||||| |||||| ||||||||||| | ||| ||| | ||| Sbjct 6789 AGAATGCGAGGACGTGGGAAATAAAGAAGCGCTCGTCGTTGTTGA--GACGCTTGTTCCA 6732 Query 869806 GT--GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 || || | | | | | | || || | || ||||||||||||| || || || ||| Sbjct 6731 GTCGTGAAGATCTTTG-GAT-AGATCAATTTCTTCGGCGGTCCAGAAGGATGCTTCTGCC 6674 Query 869864 TTTTTGTACATCTCCCA 869880 || |||||||||| ||| Sbjct 6673 TTCTTGTACATCTGCCA 6657 >seq1287 Length=27835 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| || || |||||||| || ||| || || ||| || || || ||| Sbjct 1272 GACAGCATAGGAGGAACGGTGACCTGTGTGATACGGAATTGCCCGAGTGGGCTGGGAGAG 1213 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 |||||||| |||||| | || || |||||| ||||| |||||| || ||||| ||| Sbjct 1212 CCGTGCTTCGACAAGCTTGAAGCGATGCTCGCACACGCAATGCTGAGCATACCGGCTACC 1153 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTTG 19194 |||| ||||||||||| ||||||| Sbjct 1152 AAGGCCTTCGAGATTGGGTCAGGGTTTG 1125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106915163415410