Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1886 100 2e-16 seq2048 82.4 6e-11 >seq1886 Length=76891 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||| ||||| ||| ||||||||||||||||||| | ||| || || Sbjct 24094 ATGCAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCA 24153 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | | || || |||||| || || || ||| | || ||||||| Sbjct 24154 GATACTATTGACAACGTCAAGTCTAAGATTCAGGATAAGGAGGGCATTCCTCCGGATCAA 24213 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| || || || ||| ||||||| | | ||||| | | || |||||| Sbjct 24214 CAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAAC 24273 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || ||||| || || || | || ||||| Sbjct 24274 ATCCAAAAGGAGTCAACTCTCCATTTGGTG 24303 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || || | ||||| || ||||| || ||||| || | Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || ||||| ||||| |||||| | ||| ||||||| Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | |||||| || ||||| ||||||| | |||| | | || |||||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGAACGCTCTCCGACTACAAC 24045 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||||| |||||||| | ||| ||||| Sbjct 24046 ATTCAAAAGGAATCTACTCTTCACTTGGTG 24075 >seq2048 Length=41907 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 34524 CATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCG 34583 || |||||| |||||||||||||| ||||||||||| ||||| | ||||| || ||| Sbjct 10185 CAAGTTGACAATGACAGTCTTGATACCGTTGCCCTTGCCTTCAATCTTGGACTGGAGGCG 10126 Query 34584 CGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618 |||||||||||| ||||| | ||| | |||| Sbjct 10125 TTCCATTTTGTAGCGATAGAAAGGGTCGGTGACAT 10091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412827863985890