Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1886 140 2e-28 seq8 89.7 3e-13 >seq1886 Length=76891 Score = 140 bits (154), Expect = 2e-28 Identities = 162/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||| |||||||||||||| || || ||| |||| |||| Sbjct 23849 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCC 23790 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || || |||||| | || | ||||||||||| Sbjct 23789 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCC 23730 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | |||||| |||| || || Sbjct 23729 TGGATCTTCGACTTGAC--AT--TGTCGATAGTATCCGATGACTCGACCTCAAGAGTAAT 23674 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| ||||| ||||| || ||||||||||| Sbjct 23673 GGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 >seq8 Length=21116 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| ||||| || || |||| | || Sbjct 1427 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCC 1486 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 1487 TCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 1545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325681963589870