Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1396 154 1e-31 seq1595 116 3e-20 seq108 105 5e-17 >seq1396 Length=82093 Score = 154 bits (170), Expect = 1e-31 Identities = 600/934 (64%), Gaps = 18/934 (2%) Strand=Plus/Minus Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 |||||||||||| ||| ||||||| || | | || || || || | || | || Sbjct 62712 CGTTCACCCTCGTAAACTTGGATAAGCACACCGGGCTGGTTGTCGGAGAACGTGGAGAAG 62653 Query 281615 ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCA 281674 || ||| || || || || || ||||| | | ||||| | ||||||| |||| Sbjct 62652 ACCTCGGACTTCTTCGTGGGGATGGTGGTGTTGCGCTTAATAAGAGGAGTCATAACACCA 62593 Query 281675 CCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAA 281732 || || || || | ||||||||| | |||| |||||| | | | ||| | || | | Sbjct 62592 CCGGCGGTCTCAATACCAAGAGACAACGGAGCGACATCGAGCAACAGAATCTCGTTGGTA 62533 Query 281733 GTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | || || || | | |||| ||||| || || || | ||| || ||||| |||||| Sbjct 62532 GACTTGGATGAGGTGTCACCAGACAGAATGGCAGCCTGGACAGCGGCGCCATAGGCAACA 62473 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 || ||||| || || | | | ||| | | ||||| ||||| || | || | | Sbjct 62472 GCCTCATCGGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGAAGTCGGAGACCATC 62413 Query 281852 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| | |||||| ||||||| || || || || | || || || || || || Sbjct 62412 T-TCTGGATCTTAGGGATACGAGTGGAGCCGCCGACAAGAACGATCTCGTGAACAGAGGA 62354 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAA 281970 || || | || | || | || || || || || | | || || | Sbjct 62353 CTTGTCGATCTTGGCGTCGCGCAGGACACGCTCTACAGGCTCCATGGTTGATCGGAAGAG 62294 Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 282030 ||| |||||||| || || ||| | ||| | || | | ||||||| || || Sbjct 62293 GTCCTGGCAAAGTTCCTCAAAGCGAGCACGAGTGATAGAGGTGTAGAAATCAATGCCCTC 62234 Query 282031 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 | | | || || | |||||| | || || | || || || || | || ||||| | Sbjct 62233 GTAAAGGGAGTCGATTTCAATTGATGTCTGGGCGGATGAGGAGAGGGTGCGCTTAGCTCT 62174 Query 282091 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTA 282148 ||| || || |||| ||| | || | || || |||| | ||| || | ||| Sbjct 62173 TTCGCAAGCAGTCCGTAGACGACGGAGAGCACGAGC--ATTGGCAGTCAGGTCCTTCTTA 62116 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208 | |||| |||||| || | || | | || || || || ||||| || ||||| Sbjct 62115 TGCTTTCGCTTGAACTCATTGACGAAGTGGTTCACGAGGCGGTTGTCAAAGTCCTCACCA 62056 Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268 ||||| | ||||| || | || | | || | ||| | || || |||| | | | Sbjct 62055 CCCAAGTGAGTATCACCAGCAGTCGACTTAACCTCGAAGATACCCTCCTCAATGGTAAGA 61996 Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT----TT 282324 |||| ||||| ||||||||||||| || || || || || || || || Sbjct 61995 AGAGAGACATCGAATGTTCCACCACCCAGGTCGAAGATGAGGACGTTGCGCTCGCCAGTT 61936 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 ||||| || || | ||| ||||| | ||| |||||||| ||||| || || |||| Sbjct 61935 GTCTTC----TTGTCCAAACCGTACGCGATAGCGGCAGCAGTGGGTTCGTTGATTATTCG 61880 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 | ||| ||||| |||||||| || ||||| || || ||||||| || |||||||| Sbjct 61879 AAGAACGTTAAGGCCAGCAATCAGACCAGCATCCTTTGTTGCTTGTCGCTGAGAATCGTT 61820 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || ||||||||||| | || |||| |||| Sbjct 61819 GAAGTAAGCAGGAACAGTGACGACAGCAT-TGTT 61787 >seq1595 Length=41409 Score = 116 bits (128), Expect = 3e-20 Identities = 197/283 (70%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||||| ||| ||||| | |||| || | ||||| | || ||| | | Sbjct 9101 TATCGAAATCTTGACCGCCCAAATGGGTATCACCCGCAGTAGCCTTGACAGTGAACACAC 9160 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | ||| | | | |||| |||||| || |||||||||| || | || || | Sbjct 9161 CTCCTTGGATATGAAGGAGAGACACATCAAAAGTACCACCACCCAAGTCGTAGATGAGCA 9220 Query 282312 CATTCATTTCTTTGTCTTGGTTTTT--ATCA-AGACCATACGCAAAAGCAGCAGCAGTTG 282368 | ||| | ||||| || ||| ||| ||||||||||||| ||| |||||||| | Sbjct 9221 CGTTCCTCTCTTTCTCAGACTTTCCGGATCCGAGACCATACGCAATAGCGGCAGCAGTGG 9280 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | |||||||| || | | || || |||||||||||| |||||||| || ||||||| Sbjct 9281 GCTCATTAATGATACGGAGGACGTTTAGACCAGCAATTGCACCTGCATCCTTGGTGGCTT 9340 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||| || |||||| || ||||| || || ||||| || || Sbjct 9341 GTCGCTGGTTATCGTTGAAGTATGCCGGCACGGTAATGACAGC 9383 >seq108 Length=26577 Score = 105 bits (116), Expect = 5e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 432287 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACG 432346 ||| |||||||| ||| || |||| |||||||||||||||||||||||| | ||||| || Sbjct 19208 AGGGAAAGAAGGCCGTCTTCGAGGCAATTTGATGGGAAAGCGTGTCGATTTCTCTGCTCG 19149 Query 432347 TACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 |||||| ||||| |||||||| | | || | |||||||||||||| Sbjct 19148 TACAGTCATTACGGGCGATCCTAACCTGTCCCTAGACGAAGTTGGTGTTCC 19098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740496368536980