Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1023 100 3e-16 seq1886 84.2 2e-11 >seq1023 Length=12933 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 50523 GAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGC 50582 ||||| | || ||||| || || || ||||| | ||||||||| | | |||||||| Sbjct 7346 GAGTTCCTTACAGACGCATTGCCAGTCGCATTACTTGGCATGAACTCCAAACTGATGTGC 7405 Query 50583 GAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCAGCTGGGACAAC-CGAAATACT 50640 ||||||| ||||||||||| ||| | ||| || | ||| | || |||| ||| |||| Sbjct 7406 CAGTACATCGAGTTTGTTGCTGACCGTTTGCTTCTGGCA--TTGGGCAACAAGAAGTACT 7463 Query 50641 ATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACT 50700 || | ||| ||||| ||| || ||| | ||||| || || ||||| ||||||| Sbjct 7464 ATCACGCAACAAACCCGTTTGACTTCATGGAGAACATCTCTCTGTCAGGCAAGACAAACT 7523 Query 50701 TTTTCGAAAGACGTGTAGGCGAATAC 50726 | ||||| | || || || || ||| Sbjct 7524 TCTTCGAGAAGCGCGTTGGTGACTAC 7549 >seq1886 Length=76891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || |||| ||| | || ||||| | || || || ||||| |||||||| ||| Sbjct 24323 TGACCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCG 24264 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | ||| | ||| || | || || || || | |||||||| || ||||| ||| Sbjct 24263 GAAAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGA 24204 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||| || || || ||| || || | | || | || |||| | ||| Sbjct 24203 GGAATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCA 24144 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| | ||| | || |||||||| | || || ||||||||||||||| Sbjct 24143 ACTTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCATA 24093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488527328436000